Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Trim62Q80V85 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim62Q80V85 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim62Q80V85 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim62Q80V85 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim62Q80V85 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim62Q80V85 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim62Q80V85 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim62Q80V85 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim62Q80V85 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim62Q80V85 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.97■■□□□ 1.11
Trim62Q80V85 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim62Q80V85 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.97■■□□□ 1.11
Trim62Q80V85 Gm10399-202ENSMUST00000202768 748 ntBASIC21.97■■□□□ 1.11
Trim62Q80V85 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim62Q80V85 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim62Q80V85 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Trim62Q80V85 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim62Q80V85 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim62Q80V85 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim62Q80V85 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim62Q80V85 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim62Q80V85 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.96■■□□□ 1.11
Trim62Q80V85 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim62Q80V85 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim62Q80V85 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim62Q80V85 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim62Q80V85 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim62Q80V85 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim62Q80V85 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Trim62Q80V85 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim62Q80V85 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim62Q80V85 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim62Q80V85 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim62Q80V85 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim62Q80V85 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim62Q80V85 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Trim62Q80V85 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.92■■□□□ 1.1
Trim62Q80V85 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim62Q80V85 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.92■■□□□ 1.1
Trim62Q80V85 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim62Q80V85 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim62Q80V85 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim62Q80V85 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim62Q80V85 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim62Q80V85 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim62Q80V85 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.9■■□□□ 1.1
Trim62Q80V85 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim62Q80V85 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.9■■□□□ 1.1
Trim62Q80V85 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim62Q80V85 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim62Q80V85 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Trim62Q80V85 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim62Q80V85 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trim62Q80V85 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.89■■□□□ 1.09
Trim62Q80V85 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.89■■□□□ 1.09
Trim62Q80V85 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim62Q80V85 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.88■■□□□ 1.09
Trim62Q80V85 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim62Q80V85 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim62Q80V85 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.88■■□□□ 1.09
Trim62Q80V85 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim62Q80V85 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim62Q80V85 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim62Q80V85 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Trim62Q80V85 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.87■■□□□ 1.09
Trim62Q80V85 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim62Q80V85 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim62Q80V85 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim62Q80V85 Gm40881-201ENSMUST00000223397 166 ntBASIC21.87■■□□□ 1.09
Trim62Q80V85 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim62Q80V85 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim62Q80V85 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim62Q80V85 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.87■■□□□ 1.09
Trim62Q80V85 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.87■■□□□ 1.09
Trim62Q80V85 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim62Q80V85 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Trim62Q80V85 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim62Q80V85 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim62Q80V85 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.86■■□□□ 1.09
Trim62Q80V85 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim62Q80V85 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim62Q80V85 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim62Q80V85 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim62Q80V85 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim62Q80V85 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms