Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.2■■□□□ 1.3
Ush1gQ80T11 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.2■■□□□ 1.3
Ush1gQ80T11 Serp2-204ENSMUST00000228055 705 ntBASIC23.2■■□□□ 1.3
Ush1gQ80T11 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ush1gQ80T11 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ush1gQ80T11 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.19■■□□□ 1.3
Ush1gQ80T11 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ush1gQ80T11 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ush1gQ80T11 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ush1gQ80T11 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ush1gQ80T11 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Gm12821-201ENSMUST00000120022 600 ntBASIC23.18■■□□□ 1.3
Ush1gQ80T11 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ush1gQ80T11 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ush1gQ80T11 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ush1gQ80T11 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ush1gQ80T11 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Ush1gQ80T11 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Ush1gQ80T11 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ush1gQ80T11 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ush1gQ80T11 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ush1gQ80T11 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.16■■□□□ 1.3
Ush1gQ80T11 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ush1gQ80T11 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.16■■□□□ 1.3
Ush1gQ80T11 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ush1gQ80T11 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.16■■□□□ 1.3
Ush1gQ80T11 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ush1gQ80T11 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ush1gQ80T11 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ush1gQ80T11 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.14■■□□□ 1.29
Ush1gQ80T11 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ush1gQ80T11 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ush1gQ80T11 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ush1gQ80T11 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ush1gQ80T11 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.12■■□□□ 1.29
Ush1gQ80T11 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ush1gQ80T11 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ush1gQ80T11 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ush1gQ80T11 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ush1gQ80T11 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ush1gQ80T11 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ush1gQ80T11 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ush1gQ80T11 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ush1gQ80T11 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.11■■□□□ 1.29
Ush1gQ80T11 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ush1gQ80T11 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ush1gQ80T11 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.1■■□□□ 1.29
Ush1gQ80T11 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ush1gQ80T11 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ush1gQ80T11 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ush1gQ80T11 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ush1gQ80T11 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ush1gQ80T11 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ush1gQ80T11 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.09■■□□□ 1.29
Ush1gQ80T11 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ush1gQ80T11 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ush1gQ80T11 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.09■■□□□ 1.29
Ush1gQ80T11 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ush1gQ80T11 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ush1gQ80T11 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.08■■□□□ 1.29
Ush1gQ80T11 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ush1gQ80T11 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
Ush1gQ80T11 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.07■■□□□ 1.28
Ush1gQ80T11 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.07■■□□□ 1.28
Ush1gQ80T11 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms