Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Otub1Q7TQI3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otub1Q7TQI3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otub1Q7TQI3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otub1Q7TQI3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otub1Q7TQI3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otub1Q7TQI3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otub1Q7TQI3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.03■□□□□ 0.8
Otub1Q7TQI3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Otub1Q7TQI3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Otub1Q7TQI3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Otub1Q7TQI3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otub1Q7TQI3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.01■□□□□ 0.79
Otub1Q7TQI3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Otub1Q7TQI3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Otub1Q7TQI3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Otub1Q7TQI3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otub1Q7TQI3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otub1Q7TQI3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Otub1Q7TQI3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.97■□□□□ 0.79
Otub1Q7TQI3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otub1Q7TQI3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otub1Q7TQI3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Otub1Q7TQI3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Otub1Q7TQI3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Otub1Q7TQI3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Otub1Q7TQI3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otub1Q7TQI3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otub1Q7TQI3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.94■□□□□ 0.78
Otub1Q7TQI3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Otub1Q7TQI3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.94■□□□□ 0.78
Otub1Q7TQI3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Otub1Q7TQI3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
Otub1Q7TQI3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Otub1Q7TQI3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Otub1Q7TQI3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Otub1Q7TQI3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms