Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srsf1Q6PDM2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srsf1Q6PDM2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srsf1Q6PDM2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srsf1Q6PDM2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srsf1Q6PDM2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srsf1Q6PDM2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srsf1Q6PDM2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srsf1Q6PDM2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srsf1Q6PDM2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srsf1Q6PDM2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srsf1Q6PDM2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.52■□□□□ 0.56
Srsf1Q6PDM2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Srsf1Q6PDM2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srsf1Q6PDM2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Srsf1Q6PDM2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srsf1Q6PDM2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srsf1Q6PDM2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srsf1Q6PDM2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srsf1Q6PDM2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.5■□□□□ 0.55
Srsf1Q6PDM2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Srsf1Q6PDM2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srsf1Q6PDM2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.48■□□□□ 0.55
Srsf1Q6PDM2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Srsf1Q6PDM2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srsf1Q6PDM2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srsf1Q6PDM2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Gm43173-201ENSMUST00000202246 593 ntBASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srsf1Q6PDM2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Srsf1Q6PDM2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.45■□□□□ 0.54
Srsf1Q6PDM2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srsf1Q6PDM2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srsf1Q6PDM2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Srsf1Q6PDM2 Amer2-203ENSMUST00000225247 2662 ntBASIC18.43■□□□□ 0.54
Srsf1Q6PDM2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Srsf1Q6PDM2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srsf1Q6PDM2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srsf1Q6PDM2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms