Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scube3Q66PY1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Scube3Q66PY1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.26■■□□□ 1.15
Scube3Q66PY1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scube3Q66PY1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.26■■□□□ 1.15
Scube3Q66PY1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scube3Q66PY1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scube3Q66PY1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scube3Q66PY1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scube3Q66PY1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scube3Q66PY1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scube3Q66PY1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.25■■□□□ 1.15
Scube3Q66PY1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.25■■□□□ 1.15
Scube3Q66PY1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scube3Q66PY1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scube3Q66PY1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Scube3Q66PY1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Scube3Q66PY1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scube3Q66PY1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.23■■□□□ 1.15
Scube3Q66PY1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.23■■□□□ 1.15
Scube3Q66PY1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.23■■□□□ 1.15
Scube3Q66PY1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scube3Q66PY1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scube3Q66PY1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Scube3Q66PY1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scube3Q66PY1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scube3Q66PY1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scube3Q66PY1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Scube3Q66PY1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scube3Q66PY1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.21■■□□□ 1.15
Scube3Q66PY1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.21■■□□□ 1.15
Scube3Q66PY1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scube3Q66PY1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scube3Q66PY1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.21■■□□□ 1.15
Scube3Q66PY1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Scube3Q66PY1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scube3Q66PY1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.19■■□□□ 1.14
Scube3Q66PY1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scube3Q66PY1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scube3Q66PY1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.18■■□□□ 1.14
Scube3Q66PY1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.18■■□□□ 1.14
Scube3Q66PY1 Gm9959-201ENSMUST00000068277 390 ntBASIC22.18■■□□□ 1.14
Scube3Q66PY1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scube3Q66PY1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scube3Q66PY1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scube3Q66PY1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scube3Q66PY1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scube3Q66PY1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scube3Q66PY1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Scube3Q66PY1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Scube3Q66PY1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scube3Q66PY1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scube3Q66PY1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Scube3Q66PY1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Scube3Q66PY1 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.14■■□□□ 1.14
Scube3Q66PY1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Scube3Q66PY1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scube3Q66PY1 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.14■■□□□ 1.13
Scube3Q66PY1 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.14■■□□□ 1.13
Scube3Q66PY1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.14■■□□□ 1.13
Scube3Q66PY1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scube3Q66PY1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scube3Q66PY1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scube3Q66PY1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scube3Q66PY1 Gm45102-201ENSMUST00000207427 857 ntBASIC22.13■■□□□ 1.13
Scube3Q66PY1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.13■■□□□ 1.13
Scube3Q66PY1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scube3Q66PY1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms