Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col7a1Q63870 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col7a1Q63870 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
Col7a1Q63870 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.31■□□□□ 0.52
Col7a1Q63870 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col7a1Q63870 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col7a1Q63870 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col7a1Q63870 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.3■□□□□ 0.52
Col7a1Q63870 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col7a1Q63870 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col7a1Q63870 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col7a1Q63870 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col7a1Q63870 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.3■□□□□ 0.52
Col7a1Q63870 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col7a1Q63870 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.29■□□□□ 0.52
Col7a1Q63870 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col7a1Q63870 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col7a1Q63870 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.29■□□□□ 0.52
Col7a1Q63870 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col7a1Q63870 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col7a1Q63870 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col7a1Q63870 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col7a1Q63870 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col7a1Q63870 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col7a1Q63870 Gm10252-201ENSMUST00000209541 832 ntBASIC18.28■□□□□ 0.52
Col7a1Q63870 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col7a1Q63870 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.28■□□□□ 0.52
Col7a1Q63870 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col7a1Q63870 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.27■□□□□ 0.52
Col7a1Q63870 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col7a1Q63870 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col7a1Q63870 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col7a1Q63870 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col7a1Q63870 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.26■□□□□ 0.51
Col7a1Q63870 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Col7a1Q63870 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.26■□□□□ 0.51
Col7a1Q63870 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col7a1Q63870 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col7a1Q63870 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col7a1Q63870 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Gm12251-201ENSMUST00000117893 792 ntBASIC18.25■□□□□ 0.51
Col7a1Q63870 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col7a1Q63870 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col7a1Q63870 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.24■□□□□ 0.51
Col7a1Q63870 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col7a1Q63870 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col7a1Q63870 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col7a1Q63870 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col7a1Q63870 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col7a1Q63870 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.24■□□□□ 0.51
Col7a1Q63870 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col7a1Q63870 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Col7a1Q63870 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col7a1Q63870 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col7a1Q63870 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col7a1Q63870 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col7a1Q63870 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.23■□□□□ 0.51
Col7a1Q63870 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col7a1Q63870 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col7a1Q63870 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col7a1Q63870 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col7a1Q63870 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col7a1Q63870 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Col7a1Q63870 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col7a1Q63870 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.21■□□□□ 0.51
Col7a1Q63870 Gm10033-202ENSMUST00000211874 928 ntBASIC18.2■□□□□ 0.5
Col7a1Q63870 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Col7a1Q63870 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col7a1Q63870 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col7a1Q63870 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Col7a1Q63870 Nespas-201ENSMUST00000143738 1083 ntBASIC18.19■□□□□ 0.5
Col7a1Q63870 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col7a1Q63870 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col7a1Q63870 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col7a1Q63870 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col7a1Q63870 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col7a1Q63870 Gm18671-201ENSMUST00000214826 683 ntBASIC18.18■□□□□ 0.5
Col7a1Q63870 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col7a1Q63870 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col7a1Q63870 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col7a1Q63870 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col7a1Q63870 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col7a1Q63870 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col7a1Q63870 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.16■□□□□ 0.5
Col7a1Q63870 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.16■□□□□ 0.5
Col7a1Q63870 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col7a1Q63870 Gm7977-201ENSMUST00000193787 748 ntBASIC18.16■□□□□ 0.5
Col7a1Q63870 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col7a1Q63870 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.16■□□□□ 0.5
Col7a1Q63870 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.16■□□□□ 0.5
Col7a1Q63870 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col7a1Q63870 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col7a1Q63870 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Col7a1Q63870 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col7a1Q63870 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms