Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Foxf1Q61080 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Foxf1Q61080 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.73■□□□□ 0.43
Foxf1Q61080 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxf1Q61080 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Foxf1Q61080 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.73■□□□□ 0.43
Foxf1Q61080 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.73■□□□□ 0.43
Foxf1Q61080 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxf1Q61080 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxf1Q61080 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxf1Q61080 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Foxf1Q61080 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxf1Q61080 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Foxf1Q61080 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Foxf1Q61080 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.72■□□□□ 0.43
Foxf1Q61080 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.72■□□□□ 0.43
Foxf1Q61080 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Foxf1Q61080 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.72■□□□□ 0.43
Foxf1Q61080 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxf1Q61080 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.71■□□□□ 0.43
Foxf1Q61080 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Foxf1Q61080 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Foxf1Q61080 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxf1Q61080 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Foxf1Q61080 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Foxf1Q61080 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxf1Q61080 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxf1Q61080 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.7■□□□□ 0.42
Foxf1Q61080 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Foxf1Q61080 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Foxf1Q61080 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Foxf1Q61080 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Foxf1Q61080 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxf1Q61080 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxf1Q61080 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.69■□□□□ 0.42
Foxf1Q61080 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxf1Q61080 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxf1Q61080 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxf1Q61080 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxf1Q61080 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxf1Q61080 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxf1Q61080 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxf1Q61080 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxf1Q61080 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Foxf1Q61080 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxf1Q61080 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Foxf1Q61080 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.67■□□□□ 0.42
Foxf1Q61080 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxf1Q61080 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.67■□□□□ 0.42
Foxf1Q61080 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Foxf1Q61080 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxf1Q61080 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.67■□□□□ 0.42
Foxf1Q61080 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxf1Q61080 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.67■□□□□ 0.42
Foxf1Q61080 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxf1Q61080 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxf1Q61080 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxf1Q61080 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.66■□□□□ 0.42
Foxf1Q61080 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxf1Q61080 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxf1Q61080 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxf1Q61080 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxf1Q61080 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Foxf1Q61080 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Foxf1Q61080 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxf1Q61080 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Foxf1Q61080 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.64■□□□□ 0.41
Foxf1Q61080 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxf1Q61080 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxf1Q61080 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxf1Q61080 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxf1Q61080 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxf1Q61080 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Foxf1Q61080 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxf1Q61080 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxf1Q61080 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxf1Q61080 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxf1Q61080 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.62■□□□□ 0.41
Foxf1Q61080 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.62■□□□□ 0.41
Foxf1Q61080 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxf1Q61080 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Foxf1Q61080 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Foxf1Q61080 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms