Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfaip3Q60769 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.91■□□□□ 0.78
Tnfaip3Q60769 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfaip3Q60769 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfaip3Q60769 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Tnfaip3Q60769 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfaip3Q60769 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tnfaip3Q60769 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Tnfaip3Q60769 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfaip3Q60769 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.89■□□□□ 0.77
Tnfaip3Q60769 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.89■□□□□ 0.77
Tnfaip3Q60769 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.89■□□□□ 0.77
Tnfaip3Q60769 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfaip3Q60769 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfaip3Q60769 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfaip3Q60769 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfaip3Q60769 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Tnfaip3Q60769 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfaip3Q60769 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Tnfaip3Q60769 Gm14117-201ENSMUST00000122417 843 ntBASIC19.88■□□□□ 0.77
Tnfaip3Q60769 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfaip3Q60769 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfaip3Q60769 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Etf1-202ENSMUST00000180351 108 ntBASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfaip3Q60769 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfaip3Q60769 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfaip3Q60769 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.86■□□□□ 0.77
Tnfaip3Q60769 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfaip3Q60769 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfaip3Q60769 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfaip3Q60769 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfaip3Q60769 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Gm10399-202ENSMUST00000202768 748 ntBASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfaip3Q60769 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Tnfaip3Q60769 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfaip3Q60769 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfaip3Q60769 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.83■□□□□ 0.77
Tnfaip3Q60769 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfaip3Q60769 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfaip3Q60769 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfaip3Q60769 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfaip3Q60769 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.82■□□□□ 0.76
Tnfaip3Q60769 Gm40881-201ENSMUST00000223397 166 ntBASIC19.82■□□□□ 0.76
Tnfaip3Q60769 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfaip3Q60769 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.82■□□□□ 0.76
Tnfaip3Q60769 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfaip3Q60769 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.81■□□□□ 0.76
Tnfaip3Q60769 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfaip3Q60769 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfaip3Q60769 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfaip3Q60769 Gm7417-201ENSMUST00000192950 473 ntBASIC19.8■□□□□ 0.76
Tnfaip3Q60769 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
Tnfaip3Q60769 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Tnfaip3Q60769 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfaip3Q60769 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfaip3Q60769 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Tnfaip3Q60769 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfaip3Q60769 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tnfaip3Q60769 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfaip3Q60769 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfaip3Q60769 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms