Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r223Q5SSA0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vmn1r223Q5SSA0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r223Q5SSA0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r223Q5SSA0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r223Q5SSA0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vmn1r223Q5SSA0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r223Q5SSA0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r223Q5SSA0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vmn1r223Q5SSA0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Vmn1r223Q5SSA0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Vmn1r223Q5SSA0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Gm14523-201ENSMUST00000117260 558 ntBASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Gm27502-201ENSMUST00000183495 199 ntBASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vmn1r223Q5SSA0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r223Q5SSA0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r223Q5SSA0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vmn1r223Q5SSA0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.33■□□□□ 0.52
Vmn1r223Q5SSA0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vmn1r223Q5SSA0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.33■□□□□ 0.52
Vmn1r223Q5SSA0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r223Q5SSA0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Gm7332-201ENSMUST00000118351 454 ntBASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r223Q5SSA0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r223Q5SSA0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r223Q5SSA0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.29■□□□□ 0.52
Vmn1r223Q5SSA0 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.29■□□□□ 0.52
Vmn1r223Q5SSA0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vmn1r223Q5SSA0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.29■□□□□ 0.52
Vmn1r223Q5SSA0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms