Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5d-4Q5R1F6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5d-4Q5R1F6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav5d-4Q5R1F6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5d-4Q5R1F6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5d-4Q5R1F6 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.18■□□□□ 0.5
Trav5d-4Q5R1F6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav5d-4Q5R1F6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5d-4Q5R1F6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav5d-4Q5R1F6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav5d-4Q5R1F6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5d-4Q5R1F6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.14■□□□□ 0.49
Trav5d-4Q5R1F6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5d-4Q5R1F6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trav5d-4Q5R1F6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav5d-4Q5R1F6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav5d-4Q5R1F6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav5d-4Q5R1F6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav5d-4Q5R1F6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav5d-4Q5R1F6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav5d-4Q5R1F6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav5d-4Q5R1F6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav5d-4Q5R1F6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav5d-4Q5R1F6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5d-4Q5R1F6 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.08■□□□□ 0.48
Trav5d-4Q5R1F6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5d-4Q5R1F6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5d-4Q5R1F6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav5d-4Q5R1F6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5d-4Q5R1F6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5d-4Q5R1F6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav5d-4Q5R1F6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav5d-4Q5R1F6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav5d-4Q5R1F6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav5d-4Q5R1F6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms