Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.37■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.37■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.33■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.33■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15-1-dv6-1Q5R1D2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gm8503-201ENSMUST00000118131 455 ntBASIC16.33■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15-1-dv6-1Q5R1D2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms