Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gm12253Q5NC48 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12253Q5NC48 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12253Q5NC48 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.28■□□□□ 0.52
Gm12253Q5NC48 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.28■□□□□ 0.52
Gm12253Q5NC48 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm12253Q5NC48 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12253Q5NC48 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.28■□□□□ 0.52
Gm12253Q5NC48 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.27■□□□□ 0.52
Gm12253Q5NC48 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm12253Q5NC48 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Gm12253Q5NC48 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12253Q5NC48 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12253Q5NC48 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12253Q5NC48 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12253Q5NC48 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12253Q5NC48 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm12253Q5NC48 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm12253Q5NC48 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12253Q5NC48 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12253Q5NC48 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Gm40881-201ENSMUST00000223397 166 ntBASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12253Q5NC48 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm12253Q5NC48 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12253Q5NC48 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12253Q5NC48 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12253Q5NC48 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm12253Q5NC48 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12253Q5NC48 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12253Q5NC48 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.18■□□□□ 0.5
Gm12253Q5NC48 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms