Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
Pds5bQ4VA53 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Pds5bQ4VA53 Gm10493-201ENSMUST00000097270 612 ntBASIC38.41■■■■□ 3.74
Pds5bQ4VA53 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Pds5bQ4VA53 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC38.4■■■■□ 3.74
Pds5bQ4VA53 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC38.4■■■■□ 3.74
Pds5bQ4VA53 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC38.4■■■■□ 3.74
Pds5bQ4VA53 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC38.39■■■■□ 3.74
Pds5bQ4VA53 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC38.39■■■■□ 3.74
Pds5bQ4VA53 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Pds5bQ4VA53 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Pds5bQ4VA53 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Pds5bQ4VA53 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC38.38■■■■□ 3.74
Pds5bQ4VA53 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Pds5bQ4VA53 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC38.38■■■■□ 3.73
Pds5bQ4VA53 Gm12251-201ENSMUST00000117893 792 ntBASIC38.38■■■■□ 3.73
Pds5bQ4VA53 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC38.38■■■■□ 3.73
Pds5bQ4VA53 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
Pds5bQ4VA53 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
Pds5bQ4VA53 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
Pds5bQ4VA53 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC38.36■■■■□ 3.73
Pds5bQ4VA53 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
Pds5bQ4VA53 Krt8-ps-201ENSMUST00000208495 945 ntBASIC38.36■■■■□ 3.73
Pds5bQ4VA53 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC38.36■■■■□ 3.73
Pds5bQ4VA53 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC38.36■■■■□ 3.73
Pds5bQ4VA53 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Pds5bQ4VA53 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC38.35■■■■□ 3.73
Pds5bQ4VA53 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC38.35■■■■□ 3.73
Pds5bQ4VA53 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC38.35■■■■□ 3.73
Pds5bQ4VA53 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Pds5bQ4VA53 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC38.34■■■■□ 3.73
Pds5bQ4VA53 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC38.33■■■■□ 3.73
Pds5bQ4VA53 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC38.33■■■■□ 3.73
Pds5bQ4VA53 Gm6206-201ENSMUST00000133472 2199 ntBASIC38.33■■■■□ 3.73
Pds5bQ4VA53 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Pds5bQ4VA53 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Pds5bQ4VA53 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Pds5bQ4VA53 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC38.31■■■■□ 3.72
Pds5bQ4VA53 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
Pds5bQ4VA53 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC38.3■■■■□ 3.72
Pds5bQ4VA53 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Pds5bQ4VA53 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
Pds5bQ4VA53 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC38.29■■■■□ 3.72
Pds5bQ4VA53 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Pds5bQ4VA53 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Pds5bQ4VA53 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
Pds5bQ4VA53 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC38.27■■■■□ 3.72
Pds5bQ4VA53 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Pds5bQ4VA53 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC38.27■■■■□ 3.72
Pds5bQ4VA53 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.72
Pds5bQ4VA53 Cdc34b-202ENSMUST00000188741 1252 ntBASIC38.26■■■■□ 3.72
Pds5bQ4VA53 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Pds5bQ4VA53 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC38.26■■■■□ 3.72
Pds5bQ4VA53 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Pds5bQ4VA53 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC38.25■■■■□ 3.71
Pds5bQ4VA53 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Pds5bQ4VA53 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Pds5bQ4VA53 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC38.25■■■■□ 3.71
Pds5bQ4VA53 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC38.24■■■■□ 3.71
Pds5bQ4VA53 Gm5576-201ENSMUST00000075809 1236 ntBASIC38.24■■■■□ 3.71
Pds5bQ4VA53 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC38.24■■■■□ 3.71
Pds5bQ4VA53 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
Pds5bQ4VA53 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
Pds5bQ4VA53 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC38.23■■■■□ 3.71
Pds5bQ4VA53 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC38.23■■■■□ 3.71
Pds5bQ4VA53 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Pds5bQ4VA53 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC38.22■■■■□ 3.71
Pds5bQ4VA53 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Pds5bQ4VA53 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC38.21■■■■□ 3.71
Pds5bQ4VA53 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC38.21■■■■□ 3.71
Pds5bQ4VA53 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
Pds5bQ4VA53 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC38.2■■■■□ 3.71
Pds5bQ4VA53 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC38.2■■■■□ 3.71
Pds5bQ4VA53 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Pds5bQ4VA53 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Pds5bQ4VA53 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC38.19■■■■□ 3.7
Pds5bQ4VA53 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Pds5bQ4VA53 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC38.19■■■■□ 3.7
Pds5bQ4VA53 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC38.19■■■■□ 3.7
Pds5bQ4VA53 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
Pds5bQ4VA53 AC099934.2-201ENSMUST00000196389 70 ntBASIC38.18■■■■□ 3.7
Pds5bQ4VA53 AC156953.1-201ENSMUST00000196953 70 ntBASIC38.18■■■■□ 3.7
Pds5bQ4VA53 AC157822.2-201ENSMUST00000200291 70 ntBASIC38.18■■■■□ 3.7
Pds5bQ4VA53 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC38.18■■■■□ 3.7
Pds5bQ4VA53 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC38.17■■■■□ 3.7
Pds5bQ4VA53 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC38.16■■■■□ 3.7
Pds5bQ4VA53 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Pds5bQ4VA53 Gm8770-201ENSMUST00000121113 1109 ntBASIC38.16■■■■□ 3.7
Pds5bQ4VA53 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
Pds5bQ4VA53 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Pds5bQ4VA53 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Pds5bQ4VA53 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Pds5bQ4VA53 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
Pds5bQ4VA53 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC38.13■■■■□ 3.7
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms