Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.6■□□□□ 0.89
Tmed1Q3V009 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tmed1Q3V009 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tmed1Q3V009 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tmed1Q3V009 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tmed1Q3V009 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmed1Q3V009 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.59■□□□□ 0.89
Tmed1Q3V009 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmed1Q3V009 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmed1Q3V009 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmed1Q3V009 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmed1Q3V009 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tmed1Q3V009 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.58■□□□□ 0.89
Tmed1Q3V009 Gm44428-201ENSMUST00000204474 874 ntBASIC20.58■□□□□ 0.89
Tmed1Q3V009 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tmed1Q3V009 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.58■□□□□ 0.88
Tmed1Q3V009 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmed1Q3V009 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmed1Q3V009 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmed1Q3V009 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.56■□□□□ 0.88
Tmed1Q3V009 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmed1Q3V009 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmed1Q3V009 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tmed1Q3V009 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.55■□□□□ 0.88
Tmed1Q3V009 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmed1Q3V009 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmed1Q3V009 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tmed1Q3V009 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tmed1Q3V009 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.53■□□□□ 0.88
Tmed1Q3V009 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmed1Q3V009 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Gm6311-201ENSMUST00000073790 878 ntBASIC20.52■□□□□ 0.88
Tmed1Q3V009 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmed1Q3V009 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmed1Q3V009 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmed1Q3V009 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmed1Q3V009 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmed1Q3V009 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Tmed1Q3V009 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmed1Q3V009 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.5■□□□□ 0.87
Tmed1Q3V009 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.5■□□□□ 0.87
Tmed1Q3V009 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.49■□□□□ 0.87
Tmed1Q3V009 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmed1Q3V009 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.49■□□□□ 0.87
Tmed1Q3V009 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms