Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa3Q3UPR0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa3Q3UPR0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa3Q3UPR0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa3Q3UPR0 Gm11687-201ENSMUST00000118911 886 ntBASIC18.23■□□□□ 0.51
Shisa3Q3UPR0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa3Q3UPR0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Mir6538-201ENSMUST00000183713 110 ntBASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa3Q3UPR0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shisa3Q3UPR0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Shisa3Q3UPR0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa3Q3UPR0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Shisa3Q3UPR0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.2■□□□□ 0.5
Shisa3Q3UPR0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa3Q3UPR0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa3Q3UPR0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Terc-201ENSMUST00000082862 423 ntBASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.19■□□□□ 0.5
Shisa3Q3UPR0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
Shisa3Q3UPR0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Golph3-202ENSMUST00000226517 2359 ntBASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shisa3Q3UPR0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.16■□□□□ 0.5
Shisa3Q3UPR0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Shisa3Q3UPR0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shisa3Q3UPR0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shisa3Q3UPR0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shisa3Q3UPR0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms