Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.77■■□□□ 1.72
Col5a2Q3U962 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col5a2Q3U962 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
Col5a2Q3U962 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col5a2Q3U962 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
Col5a2Q3U962 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col5a2Q3U962 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Col5a2Q3U962 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col5a2Q3U962 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col5a2Q3U962 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col5a2Q3U962 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col5a2Q3U962 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.75■■□□□ 1.71
Col5a2Q3U962 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col5a2Q3U962 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col5a2Q3U962 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col5a2Q3U962 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Col5a2Q3U962 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col5a2Q3U962 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col5a2Q3U962 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col5a2Q3U962 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col5a2Q3U962 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Gm43137-201ENSMUST00000198052 594 ntBASIC25.73■■□□□ 1.71
Col5a2Q3U962 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col5a2Q3U962 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col5a2Q3U962 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC25.72■■□□□ 1.71
Col5a2Q3U962 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col5a2Q3U962 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.72■■□□□ 1.71
Col5a2Q3U962 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col5a2Q3U962 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC25.72■■□□□ 1.71
Col5a2Q3U962 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col5a2Q3U962 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col5a2Q3U962 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.71■■□□□ 1.71
Col5a2Q3U962 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Col5a2Q3U962 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Col5a2Q3U962 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Col5a2Q3U962 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Col5a2Q3U962 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.7■■□□□ 1.7
Col5a2Q3U962 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Col5a2Q3U962 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Col5a2Q3U962 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC25.69■■□□□ 1.7
Col5a2Q3U962 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Col5a2Q3U962 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col5a2Q3U962 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col5a2Q3U962 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Col5a2Q3U962 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col5a2Q3U962 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Col5a2Q3U962 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col5a2Q3U962 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.67■■□□□ 1.7
Col5a2Q3U962 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col5a2Q3U962 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col5a2Q3U962 Gm43173-201ENSMUST00000202246 593 ntBASIC25.66■■□□□ 1.7
Col5a2Q3U962 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col5a2Q3U962 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Col5a2Q3U962 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col5a2Q3U962 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.66■■□□□ 1.7
Col5a2Q3U962 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Krt8-ps-201ENSMUST00000208495 945 ntBASIC25.65■■□□□ 1.7
Col5a2Q3U962 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col5a2Q3U962 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col5a2Q3U962 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Col5a2Q3U962 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col5a2Q3U962 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Col5a2Q3U962 Mir7075-201ENSMUST00000184187 82 ntBASIC25.64■■□□□ 1.69
Col5a2Q3U962 Gm5874-201ENSMUST00000096101 508 ntBASIC25.64■■□□□ 1.69
Col5a2Q3U962 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col5a2Q3U962 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col5a2Q3U962 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col5a2Q3U962 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC25.62■■□□□ 1.69
Col5a2Q3U962 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col5a2Q3U962 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col5a2Q3U962 Gm9870-201ENSMUST00000063874 645 ntBASIC25.61■■□□□ 1.69
Col5a2Q3U962 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Col5a2Q3U962 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col5a2Q3U962 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms