Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q3KNL4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q3KNL4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Q3KNL4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Q3KNL4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Q3KNL4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.72■□□□□ 0.91
Q3KNL4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.71■□□□□ 0.91
Q3KNL4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.71■□□□□ 0.91
Q3KNL4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q3KNL4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.7■□□□□ 0.9
Q3KNL4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3KNL4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3KNL4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.7■□□□□ 0.9
Q3KNL4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Q3KNL4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q3KNL4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Q3KNL4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Gm27502-201ENSMUST00000183495 199 ntBASIC20.69■□□□□ 0.9
Q3KNL4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Q3KNL4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Q3KNL4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.69■□□□□ 0.9
Q3KNL4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q3KNL4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3KNL4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3KNL4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3KNL4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Q3KNL4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q3KNL4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
Q3KNL4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3KNL4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3KNL4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q3KNL4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.67■□□□□ 0.9
Q3KNL4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Q3KNL4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.66■□□□□ 0.9
Q3KNL4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.66■□□□□ 0.9
Q3KNL4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.66■□□□□ 0.9
Q3KNL4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Q3KNL4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q3KNL4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Q3KNL4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3KNL4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q3KNL4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.65■□□□□ 0.9
Q3KNL4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3KNL4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3KNL4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3KNL4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q3KNL4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Q3KNL4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Q3KNL4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q3KNL4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.64■□□□□ 0.89
Q3KNL4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3KNL4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3KNL4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Q3KNL4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q3KNL4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q3KNL4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Q3KNL4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q3KNL4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q3KNL4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.63■□□□□ 0.89
Q3KNL4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Q3KNL4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q3KNL4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q3KNL4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q3KNL4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3KNL4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.62■□□□□ 0.89
Q3KNL4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3KNL4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q3KNL4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.61■□□□□ 0.89
Q3KNL4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Q3KNL4 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.61■□□□□ 0.89
Q3KNL4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q3KNL4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q3KNL4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Q3KNL4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q3KNL4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.6■□□□□ 0.89
Q3KNL4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.6■□□□□ 0.89
Q3KNL4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.6■□□□□ 0.89
Q3KNL4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q3KNL4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms