Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Notch1Q01705 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Notch1Q01705 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Notch1Q01705 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.48■□□□□ 0.07
Notch1Q01705 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Notch1Q01705 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Notch1Q01705 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.48■□□□□ 0.07
Notch1Q01705 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.48■□□□□ 0.07
Notch1Q01705 AC153890.1-201ENSMUST00000220021 2469 ntBASIC15.47■□□□□ 0.07
Notch1Q01705 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.47■□□□□ 0.07
Notch1Q01705 Gm27405-201ENSMUST00000184201 112 ntBASIC15.47■□□□□ 0.07
Notch1Q01705 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Notch1Q01705 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Notch1Q01705 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Notch1Q01705 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Notch1Q01705 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Notch1Q01705 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.46■□□□□ 0.07
Notch1Q01705 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Notch1Q01705 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Notch1Q01705 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Notch1Q01705 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Notch1Q01705 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Notch1Q01705 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Notch1Q01705 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Notch1Q01705 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Notch1Q01705 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Notch1Q01705 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Notch1Q01705 Gm43137-201ENSMUST00000198052 594 ntBASIC15.45■□□□□ 0.06
Notch1Q01705 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Notch1Q01705 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Notch1Q01705 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Notch1Q01705 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Notch1Q01705 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Notch1Q01705 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Notch1Q01705 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.45■□□□□ 0.06
Notch1Q01705 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Notch1Q01705 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Notch1Q01705 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Notch1Q01705 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Notch1Q01705 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Notch1Q01705 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Notch1Q01705 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Notch1Q01705 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Notch1Q01705 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.43■□□□□ 0.06
Notch1Q01705 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Notch1Q01705 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.43■□□□□ 0.06
Notch1Q01705 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.43■□□□□ 0.06
Notch1Q01705 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Notch1Q01705 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Notch1Q01705 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Notch1Q01705 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.42■□□□□ 0.06
Notch1Q01705 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Notch1Q01705 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.42■□□□□ 0.06
Notch1Q01705 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Notch1Q01705 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Notch1Q01705 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Notch1Q01705 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.42■□□□□ 0.06
Notch1Q01705 Gm43017-201ENSMUST00000198296 752 ntBASIC15.42■□□□□ 0.06
Notch1Q01705 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Notch1Q01705 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Notch1Q01705 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Notch1Q01705 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Notch1Q01705 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Notch1Q01705 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Notch1Q01705 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Notch1Q01705 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Notch1Q01705 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Notch1Q01705 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.4■□□□□ 0.06
Notch1Q01705 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Notch1Q01705 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Gm26571-201ENSMUST00000181399 666 ntBASIC15.4■□□□□ 0.06
Notch1Q01705 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Notch1Q01705 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch1Q01705 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch1Q01705 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch1Q01705 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch1Q01705 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Notch1Q01705 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.39■□□□□ 0.05
Notch1Q01705 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch1Q01705 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Notch1Q01705 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch1Q01705 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Notch1Q01705 Gm8493-201ENSMUST00000196881 489 ntBASIC15.38■□□□□ 0.05
Notch1Q01705 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Notch1Q01705 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Notch1Q01705 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Notch1Q01705 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms