Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smad4P97471 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smad4P97471 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smad4P97471 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smad4P97471 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.7■■□□□ 1.06
Smad4P97471 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.69■■□□□ 1.06
Smad4P97471 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.69■■□□□ 1.06
Smad4P97471 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smad4P97471 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smad4P97471 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smad4P97471 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smad4P97471 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smad4P97471 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smad4P97471 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smad4P97471 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smad4P97471 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smad4P97471 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smad4P97471 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smad4P97471 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smad4P97471 Gm27405-201ENSMUST00000184201 112 ntBASIC21.66■■□□□ 1.06
Smad4P97471 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smad4P97471 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.66■■□□□ 1.06
Smad4P97471 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smad4P97471 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.66■■□□□ 1.06
Smad4P97471 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smad4P97471 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Smad4P97471 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smad4P97471 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.65■■□□□ 1.06
Smad4P97471 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Smad4P97471 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smad4P97471 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smad4P97471 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smad4P97471 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smad4P97471 Gm42569-201ENSMUST00000200539 472 ntBASIC21.64■■□□□ 1.05
Smad4P97471 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smad4P97471 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smad4P97471 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smad4P97471 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smad4P97471 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.63■■□□□ 1.05
Smad4P97471 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smad4P97471 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.63■■□□□ 1.05
Smad4P97471 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smad4P97471 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.63■■□□□ 1.05
Smad4P97471 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smad4P97471 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
Smad4P97471 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Smad4P97471 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smad4P97471 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smad4P97471 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.62■■□□□ 1.05
Smad4P97471 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smad4P97471 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smad4P97471 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Smad4P97471 Gm43173-201ENSMUST00000202246 593 ntBASIC21.62■■□□□ 1.05
Smad4P97471 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.62■■□□□ 1.05
Smad4P97471 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smad4P97471 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Smad4P97471 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.61■■□□□ 1.05
Smad4P97471 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smad4P97471 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smad4P97471 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smad4P97471 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.61■■□□□ 1.05
Smad4P97471 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smad4P97471 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smad4P97471 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.61■■□□□ 1.05
Smad4P97471 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.6■■□□□ 1.05
Smad4P97471 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smad4P97471 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smad4P97471 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smad4P97471 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smad4P97471 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smad4P97471 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smad4P97471 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smad4P97471 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.59■■□□□ 1.05
Smad4P97471 Gm26571-201ENSMUST00000181399 666 ntBASIC21.59■■□□□ 1.05
Smad4P97471 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.59■■□□□ 1.05
Smad4P97471 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Smad4P97471 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Smad4P97471 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smad4P97471 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smad4P97471 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Smad4P97471 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smad4P97471 Gm27011-201ENSMUST00000182352 972 ntBASIC21.58■■□□□ 1.05
Smad4P97471 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.58■■□□□ 1.05
Smad4P97471 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Smad4P97471 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Smad4P97471 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.57■■□□□ 1.04
Smad4P97471 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.57■■□□□ 1.04
Smad4P97471 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Smad4P97471 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.57■■□□□ 1.04
Smad4P97471 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Smad4P97471 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smad4P97471 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smad4P97471 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smad4P97471 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.56■■□□□ 1.04
Smad4P97471 Gm10493-201ENSMUST00000097270 612 ntBASIC21.56■■□□□ 1.04
Smad4P97471 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smad4P97471 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smad4P97471 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smad4P97471 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smad4P97471 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms