Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npas1P97459 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npas1P97459 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npas1P97459 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npas1P97459 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.6■□□□□ 0.41
Npas1P97459 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Npas1P97459 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Npas1P97459 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Npas1P97459 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npas1P97459 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npas1P97459 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Npas1P97459 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.59■□□□□ 0.41
Npas1P97459 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npas1P97459 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npas1P97459 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npas1P97459 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npas1P97459 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npas1P97459 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npas1P97459 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Npas1P97459 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npas1P97459 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.58■□□□□ 0.4
Npas1P97459 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Npas1P97459 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Npas1P97459 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npas1P97459 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Npas1P97459 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npas1P97459 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npas1P97459 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Npas1P97459 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.57■□□□□ 0.4
Npas1P97459 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.57■□□□□ 0.4
Npas1P97459 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Gm9812-201ENSMUST00000061934 968 ntBASIC17.57■□□□□ 0.4
Npas1P97459 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.57■□□□□ 0.4
Npas1P97459 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npas1P97459 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npas1P97459 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.56■□□□□ 0.4
Npas1P97459 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npas1P97459 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npas1P97459 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npas1P97459 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.56■□□□□ 0.4
Npas1P97459 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npas1P97459 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npas1P97459 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npas1P97459 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Npas1P97459 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.55■□□□□ 0.4
Npas1P97459 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npas1P97459 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npas1P97459 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas1P97459 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas1P97459 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas1P97459 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Npas1P97459 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.54■□□□□ 0.4
Npas1P97459 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npas1P97459 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas1P97459 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.54■□□□□ 0.4
Npas1P97459 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npas1P97459 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Npas1P97459 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npas1P97459 Gm8503-201ENSMUST00000118131 455 ntBASIC17.53■□□□□ 0.4
Npas1P97459 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.53■□□□□ 0.4
Npas1P97459 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.53■□□□□ 0.4
Npas1P97459 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.53■□□□□ 0.4
Npas1P97459 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas1P97459 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npas1P97459 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Npas1P97459 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Npas1P97459 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas1P97459 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npas1P97459 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npas1P97459 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npas1P97459 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Npas1P97459 Gm45364-201ENSMUST00000210883 159 ntBASIC17.52■□□□□ 0.4
Npas1P97459 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npas1P97459 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npas1P97459 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.52■□□□□ 0.39
Npas1P97459 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.52■□□□□ 0.39
Npas1P97459 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npas1P97459 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
Npas1P97459 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
Npas1P97459 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Npas1P97459 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Gm22567-201ENSMUST00000175542 342 ntBASIC17.5■□□□□ 0.39
Npas1P97459 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.5■□□□□ 0.39
Npas1P97459 Mir3960-201ENSMUST00000198213 73 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms