Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smad5P97454 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smad5P97454 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smad5P97454 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smad5P97454 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Smad5P97454 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.97■□□□□ 0.79
Smad5P97454 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.97■□□□□ 0.79
Smad5P97454 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smad5P97454 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smad5P97454 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smad5P97454 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smad5P97454 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Smad5P97454 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smad5P97454 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smad5P97454 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smad5P97454 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Smad5P97454 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Smad5P97454 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smad5P97454 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.95■□□□□ 0.78
Smad5P97454 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Smad5P97454 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.95■□□□□ 0.78
Smad5P97454 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smad5P97454 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smad5P97454 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Smad5P97454 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.94■□□□□ 0.78
Smad5P97454 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Smad5P97454 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.94■□□□□ 0.78
Smad5P97454 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.94■□□□□ 0.78
Smad5P97454 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smad5P97454 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smad5P97454 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
Smad5P97454 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smad5P97454 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smad5P97454 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Smad5P97454 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smad5P97454 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smad5P97454 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smad5P97454 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smad5P97454 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.91■□□□□ 0.78
Smad5P97454 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.91■□□□□ 0.78
Smad5P97454 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.91■□□□□ 0.78
Smad5P97454 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.91■□□□□ 0.78
Smad5P97454 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smad5P97454 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smad5P97454 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smad5P97454 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.9■□□□□ 0.78
Smad5P97454 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smad5P97454 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smad5P97454 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.89■□□□□ 0.78
Smad5P97454 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smad5P97454 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad5P97454 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.89■□□□□ 0.77
Smad5P97454 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.89■□□□□ 0.77
Smad5P97454 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad5P97454 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad5P97454 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad5P97454 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad5P97454 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smad5P97454 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.89■□□□□ 0.77
Smad5P97454 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smad5P97454 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smad5P97454 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.88■□□□□ 0.77
Smad5P97454 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smad5P97454 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smad5P97454 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.87■□□□□ 0.77
Smad5P97454 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smad5P97454 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smad5P97454 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smad5P97454 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms