Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
H3f3aP84244 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
H3f3aP84244 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.89■□□□□ 0.61
H3f3aP84244 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H3f3aP84244 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H3f3aP84244 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H3f3aP84244 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.88■□□□□ 0.61
H3f3aP84244 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.88■□□□□ 0.61
H3f3aP84244 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
H3f3aP84244 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.88■□□□□ 0.61
H3f3aP84244 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3aP84244 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
H3f3aP84244 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Gm5812-201ENSMUST00000061073 957 ntBASIC18.87■□□□□ 0.61
H3f3aP84244 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3aP84244 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3f3aP84244 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3f3aP84244 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3f3aP84244 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3f3aP84244 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
H3f3aP84244 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3f3aP84244 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
H3f3aP84244 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
H3f3aP84244 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
H3f3aP84244 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3f3aP84244 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
H3f3aP84244 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.85■□□□□ 0.61
H3f3aP84244 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3f3aP84244 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
H3f3aP84244 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.84■□□□□ 0.61
H3f3aP84244 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.84■□□□□ 0.61
H3f3aP84244 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.84■□□□□ 0.61
H3f3aP84244 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3f3aP84244 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H3f3aP84244 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H3f3aP84244 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
H3f3aP84244 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
H3f3aP84244 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H3f3aP84244 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
H3f3aP84244 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.83■□□□□ 0.6
H3f3aP84244 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3f3aP84244 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3f3aP84244 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.82■□□□□ 0.6
H3f3aP84244 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3f3aP84244 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3f3aP84244 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3f3aP84244 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.82■□□□□ 0.6
H3f3aP84244 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.82■□□□□ 0.6
H3f3aP84244 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
H3f3aP84244 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H3f3aP84244 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H3f3aP84244 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
H3f3aP84244 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
H3f3aP84244 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
H3f3aP84244 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3f3aP84244 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
H3f3aP84244 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3f3aP84244 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.81■□□□□ 0.6
H3f3aP84244 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H3f3aP84244 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.81■□□□□ 0.6
H3f3aP84244 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.81■□□□□ 0.6
H3f3aP84244 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H3f3aP84244 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3f3aP84244 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3f3aP84244 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H3f3aP84244 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
H3f3aP84244 Gm10232-201ENSMUST00000089221 720 ntBASIC18.8■□□□□ 0.6
H3f3aP84244 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3f3aP84244 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H3f3aP84244 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3f3aP84244 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.79■□□□□ 0.6
H3f3aP84244 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3f3aP84244 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3f3aP84244 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3f3aP84244 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H3f3aP84244 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
H3f3aP84244 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
H3f3aP84244 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms