Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.4■□□□□ 0.54
GdnfP48540 Gm44428-201ENSMUST00000204474 874 ntBASIC18.4■□□□□ 0.54
GdnfP48540 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GdnfP48540 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GdnfP48540 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GdnfP48540 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GdnfP48540 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GdnfP48540 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.39■□□□□ 0.54
GdnfP48540 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GdnfP48540 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GdnfP48540 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GdnfP48540 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.39■□□□□ 0.53
GdnfP48540 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GdnfP48540 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GdnfP48540 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GdnfP48540 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GdnfP48540 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.38■□□□□ 0.53
GdnfP48540 Mir6538-201ENSMUST00000183713 110 ntBASIC18.38■□□□□ 0.53
GdnfP48540 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GdnfP48540 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GdnfP48540 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
GdnfP48540 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GdnfP48540 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GdnfP48540 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GdnfP48540 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GdnfP48540 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GdnfP48540 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GdnfP48540 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GdnfP48540 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.35■□□□□ 0.53
GdnfP48540 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
GdnfP48540 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GdnfP48540 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GdnfP48540 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GdnfP48540 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
GdnfP48540 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GdnfP48540 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GdnfP48540 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GdnfP48540 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GdnfP48540 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
GdnfP48540 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
GdnfP48540 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GdnfP48540 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GdnfP48540 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GdnfP48540 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GdnfP48540 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GdnfP48540 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GdnfP48540 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GdnfP48540 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GdnfP48540 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GdnfP48540 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.32■□□□□ 0.52
GdnfP48540 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GdnfP48540 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GdnfP48540 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GdnfP48540 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GdnfP48540 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GdnfP48540 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GdnfP48540 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.31■□□□□ 0.52
GdnfP48540 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
GdnfP48540 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GdnfP48540 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GdnfP48540 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GdnfP48540 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GdnfP48540 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.3■□□□□ 0.52
GdnfP48540 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GdnfP48540 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GdnfP48540 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.3■□□□□ 0.52
GdnfP48540 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GdnfP48540 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GdnfP48540 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GdnfP48540 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GdnfP48540 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GdnfP48540 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.29■□□□□ 0.52
GdnfP48540 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GdnfP48540 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GdnfP48540 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms