Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 Gm8493-201ENSMUST00000196881 489 ntBASIC22.22■■□□□ 1.15
Cxcl12P40224 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.22■■□□□ 1.15
Cxcl12P40224 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cxcl12P40224 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcl12P40224 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcl12P40224 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcl12P40224 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cxcl12P40224 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.2■■□□□ 1.14
Cxcl12P40224 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.2■■□□□ 1.14
Cxcl12P40224 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cxcl12P40224 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cxcl12P40224 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.19■■□□□ 1.14
Cxcl12P40224 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cxcl12P40224 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cxcl12P40224 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cxcl12P40224 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cxcl12P40224 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cxcl12P40224 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cxcl12P40224 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cxcl12P40224 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cxcl12P40224 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.17■■□□□ 1.14
Cxcl12P40224 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cxcl12P40224 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cxcl12P40224 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cxcl12P40224 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cxcl12P40224 Gm7291-201ENSMUST00000199147 382 ntBASIC22.16■■□□□ 1.14
Cxcl12P40224 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cxcl12P40224 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cxcl12P40224 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cxcl12P40224 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.15■■□□□ 1.14
Cxcl12P40224 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cxcl12P40224 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cxcl12P40224 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.14■■□□□ 1.13
Cxcl12P40224 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.14■■□□□ 1.13
Cxcl12P40224 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.14■■□□□ 1.13
Cxcl12P40224 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cxcl12P40224 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cxcl12P40224 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.13■■□□□ 1.13
Cxcl12P40224 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cxcl12P40224 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.13■■□□□ 1.13
Cxcl12P40224 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cxcl12P40224 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cxcl12P40224 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cxcl12P40224 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cxcl12P40224 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cxcl12P40224 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.12■■□□□ 1.13
Cxcl12P40224 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cxcl12P40224 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cxcl12P40224 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Cxcl12P40224 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cxcl12P40224 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cxcl12P40224 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cxcl12P40224 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cxcl12P40224 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cxcl12P40224 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Cxcl12P40224 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.1■■□□□ 1.13
Cxcl12P40224 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.1■■□□□ 1.13
Cxcl12P40224 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
Cxcl12P40224 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cxcl12P40224 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cxcl12P40224 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.09■■□□□ 1.13
Cxcl12P40224 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
Cxcl12P40224 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.09■■□□□ 1.13
Cxcl12P40224 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.09■■□□□ 1.13
Cxcl12P40224 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cxcl12P40224 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cxcl12P40224 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cxcl12P40224 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cxcl12P40224 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Cxcl12P40224 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cxcl12P40224 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.08■■□□□ 1.13
Cxcl12P40224 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Cxcl12P40224 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Cxcl12P40224 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Cxcl12P40224 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cxcl12P40224 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.07■■□□□ 1.12
Cxcl12P40224 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Cxcl12P40224 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cxcl12P40224 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cxcl12P40224 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Cxcl12P40224 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cxcl12P40224 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Cxcl12P40224 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cxcl12P40224 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cxcl12P40224 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cxcl12P40224 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.05■■□□□ 1.12
Cxcl12P40224 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms