Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxa1P35582 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxa1P35582 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxa1P35582 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxa1P35582 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxa1P35582 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.62■□□□□ 0.73
Foxa1P35582 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxa1P35582 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxa1P35582 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxa1P35582 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxa1P35582 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Foxa1P35582 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Foxa1P35582 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.6■□□□□ 0.73
Foxa1P35582 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.6■□□□□ 0.73
Foxa1P35582 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Foxa1P35582 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxa1P35582 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxa1P35582 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.59■□□□□ 0.73
Foxa1P35582 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Foxa1P35582 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxa1P35582 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxa1P35582 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxa1P35582 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Foxa1P35582 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Foxa1P35582 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Foxa1P35582 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Foxa1P35582 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.58■□□□□ 0.73
Foxa1P35582 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Foxa1P35582 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxa1P35582 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxa1P35582 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxa1P35582 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Foxa1P35582 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxa1P35582 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.57■□□□□ 0.72
Foxa1P35582 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Foxa1P35582 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.57■□□□□ 0.72
Foxa1P35582 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxa1P35582 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Foxa1P35582 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxa1P35582 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Foxa1P35582 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxa1P35582 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.56■□□□□ 0.72
Foxa1P35582 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Foxa1P35582 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Foxa1P35582 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Foxa1P35582 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.56■□□□□ 0.72
Foxa1P35582 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Foxa1P35582 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Foxa1P35582 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxa1P35582 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Foxa1P35582 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxa1P35582 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Foxa1P35582 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Foxa1P35582 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Foxa1P35582 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.55■□□□□ 0.72
Foxa1P35582 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxa1P35582 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.55■□□□□ 0.72
Foxa1P35582 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxa1P35582 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Foxa1P35582 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Foxa1P35582 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.54■□□□□ 0.72
Foxa1P35582 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Foxa1P35582 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Foxa1P35582 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxa1P35582 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxa1P35582 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxa1P35582 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxa1P35582 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxa1P35582 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.53■□□□□ 0.72
Foxa1P35582 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Foxa1P35582 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxa1P35582 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxa1P35582 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxa1P35582 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxa1P35582 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxa1P35582 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Foxa1P35582 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Foxa1P35582 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms