Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.61■■□□□ 1.05
PdgfbP31240 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfbP31240 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PdgfbP31240 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PdgfbP31240 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PdgfbP31240 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PdgfbP31240 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.6■■□□□ 1.05
PdgfbP31240 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
PdgfbP31240 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PdgfbP31240 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PdgfbP31240 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.59■■□□□ 1.05
PdgfbP31240 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfbP31240 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfbP31240 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PdgfbP31240 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfbP31240 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfbP31240 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.58■■□□□ 1.05
PdgfbP31240 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfbP31240 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.58■■□□□ 1.05
PdgfbP31240 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfbP31240 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfbP31240 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PdgfbP31240 Gm5874-201ENSMUST00000096101 508 ntBASIC21.58■■□□□ 1.05
PdgfbP31240 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PdgfbP31240 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PdgfbP31240 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PdgfbP31240 Gm9870-201ENSMUST00000063874 645 ntBASIC21.57■■□□□ 1.04
PdgfbP31240 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PdgfbP31240 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfbP31240 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfbP31240 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfbP31240 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfbP31240 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PdgfbP31240 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PdgfbP31240 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfbP31240 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfbP31240 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.55■■□□□ 1.04
PdgfbP31240 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.55■■□□□ 1.04
PdgfbP31240 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfbP31240 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PdgfbP31240 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PdgfbP31240 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PdgfbP31240 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PdgfbP31240 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PdgfbP31240 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PdgfbP31240 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfbP31240 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfbP31240 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PdgfbP31240 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PdgfbP31240 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.52■■□□□ 1.04
PdgfbP31240 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PdgfbP31240 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfbP31240 Gm8493-201ENSMUST00000196881 489 ntBASIC21.52■■□□□ 1.04
PdgfbP31240 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PdgfbP31240 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.52■■□□□ 1.04
PdgfbP31240 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PdgfbP31240 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PdgfbP31240 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PdgfbP31240 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfbP31240 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfbP31240 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
PdgfbP31240 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfbP31240 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PdgfbP31240 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
PdgfbP31240 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PdgfbP31240 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PdgfbP31240 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PdgfbP31240 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.5■■□□□ 1.03
PdgfbP31240 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.5■■□□□ 1.03
PdgfbP31240 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PdgfbP31240 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PdgfbP31240 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PdgfbP31240 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PdgfbP31240 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.48■■□□□ 1.03
PdgfbP31240 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PdgfbP31240 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PdgfbP31240 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PdgfbP31240 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms