Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl3P27659 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpl3P27659 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl3P27659 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpl3P27659 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl3P27659 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl3P27659 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpl3P27659 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl3P27659 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl3P27659 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.09■□□□□ 0.81
Rpl3P27659 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl3P27659 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl3P27659 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.09■□□□□ 0.81
Rpl3P27659 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rpl3P27659 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl3P27659 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl3P27659 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpl3P27659 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpl3P27659 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rpl3P27659 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl3P27659 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl3P27659 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl3P27659 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rpl3P27659 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rpl3P27659 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl3P27659 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl3P27659 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.06■□□□□ 0.8
Rpl3P27659 Gm12366-201ENSMUST00000121722 873 ntBASIC20.06■□□□□ 0.8
Rpl3P27659 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpl3P27659 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.06■□□□□ 0.8
Rpl3P27659 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.06■□□□□ 0.8
Rpl3P27659 Gm5786-201ENSMUST00000085368 882 ntBASIC20.06■□□□□ 0.8
Rpl3P27659 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rpl3P27659 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rpl3P27659 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl3P27659 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl3P27659 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl3P27659 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl3P27659 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl3P27659 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl3P27659 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl3P27659 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rpl3P27659 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl3P27659 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rpl3P27659 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl3P27659 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.04■□□□□ 0.8
Rpl3P27659 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl3P27659 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl3P27659 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl3P27659 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl3P27659 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpl3P27659 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rpl3P27659 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Rpl3P27659 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl3P27659 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl3P27659 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
Rpl3P27659 Gm10420-201ENSMUST00000121713 882 ntBASIC20.03■□□□□ 0.8
Rpl3P27659 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl3P27659 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl3P27659 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.02■□□□□ 0.8
Rpl3P27659 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.02■□□□□ 0.8
Rpl3P27659 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.02■□□□□ 0.8
Rpl3P27659 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl3P27659 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl3P27659 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Rpl3P27659 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl3P27659 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl3P27659 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl3P27659 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl3P27659 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpl3P27659 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rpl3P27659 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpl3P27659 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rpl3P27659 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl3P27659 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rpl3P27659 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.01■□□□□ 0.79
Rpl3P27659 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rpl3P27659 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl3P27659 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl3P27659 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpl3P27659 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl3P27659 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpl3P27659 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rpl3P27659 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl3P27659 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl3P27659 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20■□□□□ 0.79
Rpl3P27659 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20■□□□□ 0.79
Rpl3P27659 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rpl3P27659 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rpl3P27659 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl3P27659 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Rpl3P27659 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms