Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cbx3P23198 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cbx3P23198 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cbx3P23198 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.1■□□□□ 0.65
Cbx3P23198 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cbx3P23198 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cbx3P23198 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cbx3P23198 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cbx3P23198 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cbx3P23198 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cbx3P23198 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cbx3P23198 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cbx3P23198 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cbx3P23198 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cbx3P23198 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cbx3P23198 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cbx3P23198 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cbx3P23198 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Cbx3P23198 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cbx3P23198 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cbx3P23198 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cbx3P23198 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cbx3P23198 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cbx3P23198 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cbx3P23198 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cbx3P23198 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cbx3P23198 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cbx3P23198 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cbx3P23198 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Cbx3P23198 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cbx3P23198 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.05■□□□□ 0.64
Cbx3P23198 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.05■□□□□ 0.64
Cbx3P23198 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.05■□□□□ 0.64
Cbx3P23198 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cbx3P23198 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cbx3P23198 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cbx3P23198 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cbx3P23198 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cbx3P23198 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.03■□□□□ 0.64
Cbx3P23198 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cbx3P23198 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cbx3P23198 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cbx3P23198 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.02■□□□□ 0.64
Cbx3P23198 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cbx3P23198 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cbx3P23198 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cbx3P23198 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.01■□□□□ 0.63
Cbx3P23198 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cbx3P23198 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cbx3P23198 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cbx3P23198 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cbx3P23198 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cbx3P23198 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cbx3P23198 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cbx3P23198 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cbx3P23198 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Cbx3P23198 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cbx3P23198 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cbx3P23198 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.99■□□□□ 0.63
Cbx3P23198 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cbx3P23198 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.98■□□□□ 0.63
Cbx3P23198 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.98■□□□□ 0.63
Cbx3P23198 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cbx3P23198 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cbx3P23198 Nkain2-201ENSMUST00000092602 558 ntBASIC18.97■□□□□ 0.63
Cbx3P23198 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.97■□□□□ 0.63
Cbx3P23198 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cbx3P23198 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cbx3P23198 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.96■□□□□ 0.63
Cbx3P23198 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cbx3P23198 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms