Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.42■■□□□ 1.02
Rb1P13405 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rb1P13405 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.4■■□□□ 1.02
Rb1P13405 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rb1P13405 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.4■■□□□ 1.02
Rb1P13405 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rb1P13405 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rb1P13405 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.4■■□□□ 1.02
Rb1P13405 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rb1P13405 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Rb1P13405 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rb1P13405 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rb1P13405 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rb1P13405 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rb1P13405 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rb1P13405 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rb1P13405 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rb1P13405 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rb1P13405 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rb1P13405 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.38■■□□□ 1.01
Rb1P13405 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rb1P13405 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.38■■□□□ 1.01
Rb1P13405 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rb1P13405 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rb1P13405 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rb1P13405 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rb1P13405 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.37■■□□□ 1.01
Rb1P13405 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rb1P13405 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rb1P13405 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rb1P13405 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Rb1P13405 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rb1P13405 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.36■■□□□ 1.01
Rb1P13405 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rb1P13405 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.36■■□□□ 1.01
Rb1P13405 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rb1P13405 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rb1P13405 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rb1P13405 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rb1P13405 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rb1P13405 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.35■■□□□ 1.01
Rb1P13405 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.34■■□□□ 1.01
Rb1P13405 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rb1P13405 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rb1P13405 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rb1P13405 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.33■■□□□ 1.01
Rb1P13405 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rb1P13405 Gm9847-201ENSMUST00000052528 599 ntBASIC21.33■■□□□ 1.01
Rb1P13405 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rb1P13405 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rb1P13405 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rb1P13405 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.32■■□□□ 1
Rb1P13405 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rb1P13405 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rb1P13405 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rb1P13405 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rb1P13405 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rb1P13405 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.31■■□□□ 1
Rb1P13405 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.31■■□□□ 1
Rb1P13405 Gm40881-201ENSMUST00000223397 166 ntBASIC21.31■■□□□ 1
Rb1P13405 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Rb1P13405 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rb1P13405 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.3■■□□□ 1
Rb1P13405 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rb1P13405 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rb1P13405 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rb1P13405 Iqck-206ENSMUST00000208658 2891 ntBASIC21.3■■□□□ 1
Rb1P13405 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rb1P13405 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rb1P13405 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rb1P13405 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rb1P13405 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rb1P13405 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rb1P13405 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rb1P13405 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms