Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NefmP08553 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NefmP08553 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
NefmP08553 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
NefmP08553 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
NefmP08553 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
NefmP08553 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
NefmP08553 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NefmP08553 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NefmP08553 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NefmP08553 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
NefmP08553 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
NefmP08553 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.3■■■□□ 2.6
NefmP08553 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NefmP08553 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
NefmP08553 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NefmP08553 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC31.29■■■□□ 2.6
NefmP08553 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NefmP08553 AC164883.3-201ENSMUST00000227396 1774 ntBASIC31.29■■■□□ 2.6
NefmP08553 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NefmP08553 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NefmP08553 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
NefmP08553 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NefmP08553 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NefmP08553 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NefmP08553 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NefmP08553 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NefmP08553 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NefmP08553 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.27■■■□□ 2.6
NefmP08553 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
NefmP08553 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
NefmP08553 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC31.26■■■□□ 2.6
NefmP08553 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
NefmP08553 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NefmP08553 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NefmP08553 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NefmP08553 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
NefmP08553 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NefmP08553 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NefmP08553 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NefmP08553 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NefmP08553 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NefmP08553 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NefmP08553 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NefmP08553 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NefmP08553 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NefmP08553 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NefmP08553 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NefmP08553 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NefmP08553 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
NefmP08553 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
NefmP08553 Nsd1-206ENSMUST00000224918 1001 ntBASIC31.23■■■□□ 2.59
NefmP08553 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
NefmP08553 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.22■■■□□ 2.59
NefmP08553 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NefmP08553 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
NefmP08553 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
NefmP08553 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.21■■■□□ 2.59
NefmP08553 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
NefmP08553 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NefmP08553 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
NefmP08553 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NefmP08553 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NefmP08553 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC31.19■■■□□ 2.58
NefmP08553 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NefmP08553 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
NefmP08553 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NefmP08553 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.19■■■□□ 2.58
NefmP08553 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
NefmP08553 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
NefmP08553 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NefmP08553 Gm11687-201ENSMUST00000118911 886 ntBASIC31.17■■■□□ 2.58
NefmP08553 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NefmP08553 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NefmP08553 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NefmP08553 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NefmP08553 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC31.16■■■□□ 2.58
NefmP08553 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NefmP08553 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NefmP08553 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
NefmP08553 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
NefmP08553 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NefmP08553 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NefmP08553 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NefmP08553 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
NefmP08553 Notumos-201ENSMUST00000151998 2659 ntBASIC31.14■■■□□ 2.58
NefmP08553 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NefmP08553 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NefmP08553 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC31.14■■■□□ 2.58
NefmP08553 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NefmP08553 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
NefmP08553 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NefmP08553 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NefmP08553 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NefmP08553 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
NefmP08553 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
NefmP08553 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NefmP08553 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
NefmP08553 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
NefmP08553 Gm44949-201ENSMUST00000206423 1450 ntBASIC31.09■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms