Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.2■■□□□ 1.14
PrnpP04925 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.2■■□□□ 1.14
PrnpP04925 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PrnpP04925 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PrnpP04925 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PrnpP04925 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.19■■□□□ 1.14
PrnpP04925 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.19■■□□□ 1.14
PrnpP04925 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PrnpP04925 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PrnpP04925 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PrnpP04925 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PrnpP04925 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PrnpP04925 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PrnpP04925 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PrnpP04925 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PrnpP04925 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PrnpP04925 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PrnpP04925 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PrnpP04925 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PrnpP04925 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PrnpP04925 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.16■■□□□ 1.14
PrnpP04925 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PrnpP04925 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PrnpP04925 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PrnpP04925 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PrnpP04925 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.14■■□□□ 1.13
PrnpP04925 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PrnpP04925 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PrnpP04925 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PrnpP04925 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PrnpP04925 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PrnpP04925 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PrnpP04925 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PrnpP04925 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PrnpP04925 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PrnpP04925 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.13■■□□□ 1.13
PrnpP04925 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PrnpP04925 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PrnpP04925 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PrnpP04925 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PrnpP04925 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.12■■□□□ 1.13
PrnpP04925 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PrnpP04925 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.11■■□□□ 1.13
PrnpP04925 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
PrnpP04925 Gm9870-201ENSMUST00000063874 645 ntBASIC22.11■■□□□ 1.13
PrnpP04925 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PrnpP04925 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PrnpP04925 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PrnpP04925 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PrnpP04925 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PrnpP04925 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PrnpP04925 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
PrnpP04925 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PrnpP04925 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.09■■□□□ 1.13
PrnpP04925 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PrnpP04925 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.09■■□□□ 1.13
PrnpP04925 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PrnpP04925 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PrnpP04925 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PrnpP04925 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PrnpP04925 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PrnpP04925 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PrnpP04925 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PrnpP04925 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PrnpP04925 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
PrnpP04925 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.07■■□□□ 1.12
PrnpP04925 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PrnpP04925 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PrnpP04925 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PrnpP04925 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PrnpP04925 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PrnpP04925 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PrnpP04925 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PrnpP04925 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PrnpP04925 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.06■■□□□ 1.12
PrnpP04925 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.06■■□□□ 1.12
PrnpP04925 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PrnpP04925 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PrnpP04925 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PrnpP04925 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PrnpP04925 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
PrnpP04925 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.05■■□□□ 1.12
PrnpP04925 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PrnpP04925 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PrnpP04925 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.04■■□□□ 1.12
PrnpP04925 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PrnpP04925 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
PrnpP04925 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PrnpP04925 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PrnpP04925 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PrnpP04925 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PrnpP04925 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 372.8 ms