Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.88□□□□□ -0.03
Sh2d1aO88890 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.88□□□□□ -0.03
Sh2d1aO88890 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh2d1aO88890 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh2d1aO88890 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.86□□□□□ -0.03
Sh2d1aO88890 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Sh2d1aO88890 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh2d1aO88890 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2d1aO88890 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.84□□□□□ -0.03
Sh2d1aO88890 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.84□□□□□ -0.03
Sh2d1aO88890 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh2d1aO88890 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2d1aO88890 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2d1aO88890 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2d1aO88890 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2d1aO88890 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2d1aO88890 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2d1aO88890 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2d1aO88890 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.82□□□□□ -0.04
Sh2d1aO88890 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2d1aO88890 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2d1aO88890 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms