Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hcn3O88705 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hcn3O88705 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.2■□□□□ 0.82
Hcn3O88705 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hcn3O88705 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.2■□□□□ 0.82
Hcn3O88705 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.19■□□□□ 0.82
Hcn3O88705 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hcn3O88705 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcn3O88705 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hcn3O88705 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hcn3O88705 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hcn3O88705 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hcn3O88705 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.18■□□□□ 0.82
Hcn3O88705 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.18■□□□□ 0.82
Hcn3O88705 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.18■□□□□ 0.82
Hcn3O88705 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hcn3O88705 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Hcn3O88705 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcn3O88705 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcn3O88705 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcn3O88705 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hcn3O88705 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Hcn3O88705 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hcn3O88705 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hcn3O88705 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Hcn3O88705 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcn3O88705 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hcn3O88705 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcn3O88705 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hcn3O88705 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hcn3O88705 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcn3O88705 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcn3O88705 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcn3O88705 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Hcn3O88705 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hcn3O88705 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.14■□□□□ 0.81
Hcn3O88705 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hcn3O88705 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hcn3O88705 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hcn3O88705 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Hcn3O88705 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcn3O88705 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcn3O88705 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcn3O88705 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.13■□□□□ 0.81
Hcn3O88705 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.12■□□□□ 0.81
Hcn3O88705 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcn3O88705 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn3O88705 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Hcn3O88705 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hcn3O88705 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.11■□□□□ 0.81
Hcn3O88705 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Hcn3O88705 Golph3-202ENSMUST00000226517 2359 ntBASIC20.1■□□□□ 0.81
Hcn3O88705 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.1■□□□□ 0.81
Hcn3O88705 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Hcn3O88705 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
Hcn3O88705 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcn3O88705 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hcn3O88705 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.09■□□□□ 0.81
Hcn3O88705 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcn3O88705 Terc-201ENSMUST00000082862 423 ntBASIC20.09■□□□□ 0.81
Hcn3O88705 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hcn3O88705 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.09■□□□□ 0.81
Hcn3O88705 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcn3O88705 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcn3O88705 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms