Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.51■□□□□ 0.87
ClppO88696 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClppO88696 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClppO88696 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ClppO88696 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
ClppO88696 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClppO88696 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ClppO88696 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.5■□□□□ 0.87
ClppO88696 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClppO88696 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ClppO88696 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClppO88696 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClppO88696 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ClppO88696 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClppO88696 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.49■□□□□ 0.87
ClppO88696 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClppO88696 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.49■□□□□ 0.87
ClppO88696 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClppO88696 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ClppO88696 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ClppO88696 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClppO88696 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClppO88696 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClppO88696 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClppO88696 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ClppO88696 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClppO88696 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClppO88696 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.47■□□□□ 0.87
ClppO88696 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
ClppO88696 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ClppO88696 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ClppO88696 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClppO88696 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClppO88696 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClppO88696 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClppO88696 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.45■□□□□ 0.86
ClppO88696 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.45■□□□□ 0.86
ClppO88696 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClppO88696 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.45■□□□□ 0.86
ClppO88696 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClppO88696 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.44■□□□□ 0.86
ClppO88696 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.44■□□□□ 0.86
ClppO88696 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClppO88696 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClppO88696 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClppO88696 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ClppO88696 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ClppO88696 Gm7417-201ENSMUST00000192950 473 ntBASIC20.43■□□□□ 0.86
ClppO88696 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ClppO88696 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClppO88696 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ClppO88696 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.42■□□□□ 0.86
ClppO88696 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
ClppO88696 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.42■□□□□ 0.86
ClppO88696 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClppO88696 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
ClppO88696 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClppO88696 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.41■□□□□ 0.86
ClppO88696 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.41■□□□□ 0.86
ClppO88696 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.41■□□□□ 0.86
ClppO88696 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClppO88696 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ClppO88696 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.41■□□□□ 0.86
ClppO88696 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClppO88696 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.41■□□□□ 0.86
ClppO88696 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.41■□□□□ 0.86
ClppO88696 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.4■□□□□ 0.86
ClppO88696 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.4■□□□□ 0.86
ClppO88696 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.4■□□□□ 0.86
ClppO88696 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ClppO88696 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ClppO88696 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ClppO88696 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ClppO88696 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ClppO88696 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ClppO88696 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms