Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1hO88427 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1hO88427 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.21■□□□□ 0.99
Cacna1hO88427 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.21■□□□□ 0.99
Cacna1hO88427 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cacna1hO88427 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1hO88427 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.2■□□□□ 0.98
Cacna1hO88427 Gm12251-201ENSMUST00000117893 792 ntBASIC21.2■□□□□ 0.98
Cacna1hO88427 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1hO88427 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cacna1hO88427 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.2■□□□□ 0.98
Cacna1hO88427 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1hO88427 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1hO88427 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1hO88427 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1hO88427 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1hO88427 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1hO88427 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.19■□□□□ 0.98
Cacna1hO88427 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.18■□□□□ 0.98
Cacna1hO88427 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1hO88427 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1hO88427 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cacna1hO88427 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.17■□□□□ 0.98
Cacna1hO88427 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cacna1hO88427 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.17■□□□□ 0.98
Cacna1hO88427 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.17■□□□□ 0.98
Cacna1hO88427 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.17■□□□□ 0.98
Cacna1hO88427 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1hO88427 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1hO88427 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cacna1hO88427 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1hO88427 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Cacna1hO88427 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.15■□□□□ 0.98
Cacna1hO88427 Gm10033-202ENSMUST00000211874 928 ntBASIC21.15■□□□□ 0.98
Cacna1hO88427 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1hO88427 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1hO88427 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.15■□□□□ 0.98
Cacna1hO88427 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1hO88427 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.15■□□□□ 0.98
Cacna1hO88427 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1hO88427 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1hO88427 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1hO88427 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.14■□□□□ 0.97
Cacna1hO88427 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1hO88427 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1hO88427 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.14■□□□□ 0.97
Cacna1hO88427 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1hO88427 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1hO88427 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cacna1hO88427 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1hO88427 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.13■□□□□ 0.97
Cacna1hO88427 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.13■□□□□ 0.97
Cacna1hO88427 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.12■□□□□ 0.97
Cacna1hO88427 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.12■□□□□ 0.97
Cacna1hO88427 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1hO88427 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1hO88427 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1hO88427 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1hO88427 Gm12933-201ENSMUST00000120203 872 ntBASIC21.11■□□□□ 0.97
Cacna1hO88427 Gm22325-201ENSMUST00000158904 308 ntBASIC21.11■□□□□ 0.97
Cacna1hO88427 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1hO88427 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.11■□□□□ 0.97
Cacna1hO88427 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1hO88427 Gm26833-201ENSMUST00000180899 440 ntBASIC21.1■□□□□ 0.97
Cacna1hO88427 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1hO88427 AV356131-201ENSMUST00000206201 750 ntBASIC21.1■□□□□ 0.97
Cacna1hO88427 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1hO88427 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1hO88427 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1hO88427 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cacna1hO88427 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1hO88427 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cacna1hO88427 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1hO88427 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.09■□□□□ 0.97
Cacna1hO88427 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1hO88427 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1hO88427 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cacna1hO88427 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1hO88427 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1hO88427 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1hO88427 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1hO88427 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1hO88427 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cacna1hO88427 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.07■□□□□ 0.96
Cacna1hO88427 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1hO88427 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1hO88427 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.07■□□□□ 0.96
Cacna1hO88427 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cacna1hO88427 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1hO88427 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.06■□□□□ 0.96
Cacna1hO88427 Gm43060-201ENSMUST00000200621 289 ntBASIC21.06■□□□□ 0.96
Cacna1hO88427 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1hO88427 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1hO88427 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms