Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.28■□□□□ 0.84
Tgfbr3O88393 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3O88393 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3O88393 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3O88393 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3O88393 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tgfbr3O88393 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Tgfbr3O88393 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tgfbr3O88393 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tgfbr3O88393 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Tgfbr3O88393 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.26■□□□□ 0.83
Tgfbr3O88393 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tgfbr3O88393 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tgfbr3O88393 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.24■□□□□ 0.83
Tgfbr3O88393 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tgfbr3O88393 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3O88393 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3O88393 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3O88393 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tgfbr3O88393 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3O88393 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.22■□□□□ 0.83
Tgfbr3O88393 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3O88393 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tgfbr3O88393 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.21■□□□□ 0.83
Tgfbr3O88393 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3O88393 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3O88393 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3O88393 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Tgfbr3O88393 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.21■□□□□ 0.83
Tgfbr3O88393 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tgfbr3O88393 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tgfbr3O88393 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tgfbr3O88393 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.2■□□□□ 0.82
Tgfbr3O88393 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tgfbr3O88393 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.2■□□□□ 0.82
Tgfbr3O88393 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.19■□□□□ 0.82
Tgfbr3O88393 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tgfbr3O88393 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tgfbr3O88393 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.18■□□□□ 0.82
Tgfbr3O88393 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tgfbr3O88393 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tgfbr3O88393 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tgfbr3O88393 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfbr3O88393 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.17■□□□□ 0.82
Tgfbr3O88393 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tgfbr3O88393 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfbr3O88393 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.17■□□□□ 0.82
Tgfbr3O88393 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfbr3O88393 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tgfbr3O88393 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr3O88393 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr3O88393 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.16■□□□□ 0.82
Tgfbr3O88393 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr3O88393 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr3O88393 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
Tgfbr3O88393 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr3O88393 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tgfbr3O88393 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tgfbr3O88393 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tgfbr3O88393 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.15■□□□□ 0.82
Tgfbr3O88393 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfbr3O88393 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tgfbr3O88393 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tgfbr3O88393 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Tgfbr3O88393 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tgfbr3O88393 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tgfbr3O88393 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tgfbr3O88393 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tgfbr3O88393 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tgfbr3O88393 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tgfbr3O88393 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms