Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vti1bO88384 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vti1bO88384 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vti1bO88384 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.06■□□□□ 0.8
Vti1bO88384 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vti1bO88384 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Vti1bO88384 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vti1bO88384 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
Vti1bO88384 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Vti1bO88384 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vti1bO88384 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.05■□□□□ 0.8
Vti1bO88384 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vti1bO88384 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vti1bO88384 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vti1bO88384 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vti1bO88384 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vti1bO88384 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vti1bO88384 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vti1bO88384 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vti1bO88384 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Vti1bO88384 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.03■□□□□ 0.8
Vti1bO88384 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vti1bO88384 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vti1bO88384 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vti1bO88384 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vti1bO88384 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vti1bO88384 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Gm22567-201ENSMUST00000175542 342 ntBASIC20.01■□□□□ 0.79
Vti1bO88384 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vti1bO88384 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.01■□□□□ 0.79
Vti1bO88384 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vti1bO88384 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Vti1bO88384 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vti1bO88384 Gm37415-201ENSMUST00000192265 2054 ntBASIC20■□□□□ 0.79
Vti1bO88384 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20■□□□□ 0.79
Vti1bO88384 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Vti1bO88384 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.99■□□□□ 0.79
Vti1bO88384 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vti1bO88384 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.99■□□□□ 0.79
Vti1bO88384 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vti1bO88384 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.99■□□□□ 0.79
Vti1bO88384 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vti1bO88384 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vti1bO88384 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vti1bO88384 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.99■□□□□ 0.79
Vti1bO88384 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vti1bO88384 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vti1bO88384 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Vti1bO88384 Notumos-201ENSMUST00000151998 2659 ntBASIC19.97■□□□□ 0.79
Vti1bO88384 Gm10420-201ENSMUST00000121713 882 ntBASIC19.97■□□□□ 0.79
Vti1bO88384 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vti1bO88384 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vti1bO88384 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Vti1bO88384 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vti1bO88384 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.96■□□□□ 0.79
Vti1bO88384 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Vti1bO88384 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vti1bO88384 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vti1bO88384 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vti1bO88384 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.96■□□□□ 0.79
Vti1bO88384 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Vti1bO88384 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.96■□□□□ 0.79
Vti1bO88384 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vti1bO88384 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Vti1bO88384 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vti1bO88384 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.95■□□□□ 0.78
Vti1bO88384 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vti1bO88384 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.94■□□□□ 0.78
Vti1bO88384 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Vti1bO88384 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.94■□□□□ 0.78
Vti1bO88384 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vti1bO88384 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Vti1bO88384 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.93■□□□□ 0.78
Vti1bO88384 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vti1bO88384 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vti1bO88384 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.93■□□□□ 0.78
Vti1bO88384 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vti1bO88384 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vti1bO88384 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vti1bO88384 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Vti1bO88384 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms