Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sigmar1O55242 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sigmar1O55242 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.58□□□□□ -0.08
Sigmar1O55242 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sigmar1O55242 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sigmar1O55242 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sigmar1O55242 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sigmar1O55242 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sigmar1O55242 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sigmar1O55242 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sigmar1O55242 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sigmar1O55242 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sigmar1O55242 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sigmar1O55242 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sigmar1O55242 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Sigmar1O55242 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.54□□□□□ -0.08
Sigmar1O55242 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.54□□□□□ -0.08
Sigmar1O55242 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sigmar1O55242 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Sigmar1O55242 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.54□□□□□ -0.08
Sigmar1O55242 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sigmar1O55242 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.53□□□□□ -0.08
Sigmar1O55242 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sigmar1O55242 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sigmar1O55242 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sigmar1O55242 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sigmar1O55242 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.52□□□□□ -0.08
Sigmar1O55242 Particl-201ENSMUST00000205370 1560 ntBASIC14.52□□□□□ -0.08
Sigmar1O55242 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sigmar1O55242 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sigmar1O55242 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sigmar1O55242 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sigmar1O55242 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Sigmar1O55242 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sigmar1O55242 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sigmar1O55242 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sigmar1O55242 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Sigmar1O55242 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sigmar1O55242 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.51□□□□□ -0.09
Sigmar1O55242 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sigmar1O55242 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.5□□□□□ -0.09
Sigmar1O55242 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC14.5□□□□□ -0.09
Sigmar1O55242 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sigmar1O55242 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.5□□□□□ -0.09
Sigmar1O55242 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.49□□□□□ -0.09
Sigmar1O55242 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sigmar1O55242 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Sigmar1O55242 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sigmar1O55242 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sigmar1O55242 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sigmar1O55242 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sigmar1O55242 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms