Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Cntnap1O54991 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cntnap1O54991 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Cntnap1O54991 AC153524.1-201ENSMUST00000220436 1935 ntBASIC28.5■■■□□ 2.15
Cntnap1O54991 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC28.5■■■□□ 2.15
Cntnap1O54991 AC099934.2-201ENSMUST00000196389 70 ntBASIC28.5■■■□□ 2.15
Cntnap1O54991 AC156953.1-201ENSMUST00000196953 70 ntBASIC28.5■■■□□ 2.15
Cntnap1O54991 AC157822.2-201ENSMUST00000200291 70 ntBASIC28.5■■■□□ 2.15
Cntnap1O54991 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cntnap1O54991 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cntnap1O54991 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cntnap1O54991 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cntnap1O54991 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cntnap1O54991 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cntnap1O54991 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cntnap1O54991 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC28.48■■■□□ 2.15
Cntnap1O54991 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cntnap1O54991 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Cntnap1O54991 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Cntnap1O54991 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
Cntnap1O54991 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cntnap1O54991 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cntnap1O54991 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cntnap1O54991 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cntnap1O54991 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Cntnap1O54991 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cntnap1O54991 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap1O54991 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap1O54991 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap1O54991 Gm9870-201ENSMUST00000063874 645 ntBASIC28.44■■■□□ 2.14
Cntnap1O54991 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap1O54991 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap1O54991 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cntnap1O54991 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cntnap1O54991 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC28.43■■■□□ 2.14
Cntnap1O54991 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cntnap1O54991 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Cntnap1O54991 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cntnap1O54991 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cntnap1O54991 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Cntnap1O54991 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Cntnap1O54991 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cntnap1O54991 AC117245.4-201ENSMUST00000217388 1646 ntBASIC28.41■■■□□ 2.14
Cntnap1O54991 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cntnap1O54991 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cntnap1O54991 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cntnap1O54991 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC28.4■■■□□ 2.14
Cntnap1O54991 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cntnap1O54991 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cntnap1O54991 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cntnap1O54991 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC28.39■■■□□ 2.14
Cntnap1O54991 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Cntnap1O54991 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cntnap1O54991 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Cntnap1O54991 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC28.38■■■□□ 2.13
Cntnap1O54991 Krt8-ps-201ENSMUST00000208495 945 ntBASIC28.38■■■□□ 2.13
Cntnap1O54991 Gm5576-201ENSMUST00000075809 1236 ntBASIC28.38■■■□□ 2.13
Cntnap1O54991 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cntnap1O54991 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cntnap1O54991 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Cntnap1O54991 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC28.37■■■□□ 2.13
Cntnap1O54991 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cntnap1O54991 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cntnap1O54991 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cntnap1O54991 Gm10129-202ENSMUST00000193100 1316 ntBASIC28.36■■■□□ 2.13
Cntnap1O54991 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cntnap1O54991 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cntnap1O54991 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cntnap1O54991 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC28.35■■■□□ 2.13
Cntnap1O54991 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC28.35■■■□□ 2.13
Cntnap1O54991 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap1O54991 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap1O54991 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap1O54991 Gm26833-201ENSMUST00000180899 440 ntBASIC28.34■■■□□ 2.13
Cntnap1O54991 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap1O54991 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cntnap1O54991 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cntnap1O54991 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC28.33■■■□□ 2.13
Cntnap1O54991 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cntnap1O54991 Gm43060-201ENSMUST00000200621 289 ntBASIC28.33■■■□□ 2.13
Cntnap1O54991 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC28.32■■■□□ 2.12
Cntnap1O54991 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Cntnap1O54991 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cntnap1O54991 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.31■■■□□ 2.12
Cntnap1O54991 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
Cntnap1O54991 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cntnap1O54991 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
Cntnap1O54991 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cntnap1O54991 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cntnap1O54991 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC28.29■■■□□ 2.12
Cntnap1O54991 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Cntnap1O54991 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Cntnap1O54991 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cntnap1O54991 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Cntnap1O54991 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
Cntnap1O54991 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cntnap1O54991 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cntnap1O54991 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cntnap1O54991 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cntnap1O54991 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms