Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phox2bO35690 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phox2bO35690 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phox2bO35690 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Phox2bO35690 Gm10399-202ENSMUST00000202768 748 ntBASIC21.25■□□□□ 0.99
Phox2bO35690 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Phox2bO35690 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phox2bO35690 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phox2bO35690 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Phox2bO35690 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Phox2bO35690 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Phox2bO35690 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Phox2bO35690 Gm42569-201ENSMUST00000200539 472 ntBASIC21.23■□□□□ 0.99
Phox2bO35690 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Phox2bO35690 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Phox2bO35690 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Phox2bO35690 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Phox2bO35690 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Phox2bO35690 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Phox2bO35690 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phox2bO35690 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Phox2bO35690 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.21■□□□□ 0.99
Phox2bO35690 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Phox2bO35690 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Phox2bO35690 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.2■□□□□ 0.98
Phox2bO35690 Gm37179-201ENSMUST00000194862 823 ntBASIC21.2■□□□□ 0.98
Phox2bO35690 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Phox2bO35690 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Phox2bO35690 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.19■□□□□ 0.98
Phox2bO35690 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Phox2bO35690 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Phox2bO35690 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Phox2bO35690 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Phox2bO35690 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Phox2bO35690 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Phox2bO35690 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Phox2bO35690 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Phox2bO35690 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phox2bO35690 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phox2bO35690 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phox2bO35690 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Phox2bO35690 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Phox2bO35690 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Phox2bO35690 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Phox2bO35690 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Phox2bO35690 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Phox2bO35690 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phox2bO35690 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Phox2bO35690 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Phox2bO35690 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Phox2bO35690 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.16■□□□□ 0.98
Phox2bO35690 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Phox2bO35690 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Phox2bO35690 Mir7075-201ENSMUST00000184187 82 ntBASIC21.16■□□□□ 0.98
Phox2bO35690 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Phox2bO35690 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Phox2bO35690 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Phox2bO35690 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Phox2bO35690 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Phox2bO35690 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Phox2bO35690 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
Phox2bO35690 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Phox2bO35690 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Phox2bO35690 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Phox2bO35690 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Phox2bO35690 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Phox2bO35690 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.14■□□□□ 0.97
Phox2bO35690 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Phox2bO35690 Gm43137-201ENSMUST00000198052 594 ntBASIC21.14■□□□□ 0.97
Phox2bO35690 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Phox2bO35690 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Phox2bO35690 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.14■□□□□ 0.97
Phox2bO35690 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Phox2bO35690 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.13■□□□□ 0.97
Phox2bO35690 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Phox2bO35690 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.13■□□□□ 0.97
Phox2bO35690 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Phox2bO35690 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Phox2bO35690 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.12■□□□□ 0.97
Phox2bO35690 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Phox2bO35690 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms