Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cl1O35188 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cl1O35188 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.83■□□□□ 0.77
Cx3cl1O35188 Gm15546-201ENSMUST00000122095 826 ntBASIC19.83■□□□□ 0.77
Cx3cl1O35188 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cx3cl1O35188 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cx3cl1O35188 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cl1O35188 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cl1O35188 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cl1O35188 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cl1O35188 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cx3cl1O35188 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cl1O35188 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cx3cl1O35188 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cx3cl1O35188 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cx3cl1O35188 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cl1O35188 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.81■□□□□ 0.76
Cx3cl1O35188 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Cx3cl1O35188 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cx3cl1O35188 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cl1O35188 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Gm10232-201ENSMUST00000089221 720 ntBASIC19.8■□□□□ 0.76
Cx3cl1O35188 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cl1O35188 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cl1O35188 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cl1O35188 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cl1O35188 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cl1O35188 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cl1O35188 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cl1O35188 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cl1O35188 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cl1O35188 Gm15820-201ENSMUST00000201566 728 ntBASIC19.77■□□□□ 0.76
Cx3cl1O35188 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cl1O35188 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cx3cl1O35188 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.76■□□□□ 0.75
Cx3cl1O35188 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cl1O35188 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cl1O35188 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cl1O35188 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cl1O35188 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cl1O35188 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.73■□□□□ 0.75
Cx3cl1O35188 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cl1O35188 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.73■□□□□ 0.75
Cx3cl1O35188 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cl1O35188 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cx3cl1O35188 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cl1O35188 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cl1O35188 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cx3cl1O35188 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.72■□□□□ 0.75
Cx3cl1O35188 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cl1O35188 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cl1O35188 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cl1O35188 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cl1O35188 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cl1O35188 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms