Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.28■□□□□ 0.52
Gfra3O35118 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gfra3O35118 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gfra3O35118 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gfra3O35118 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gfra3O35118 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.27■□□□□ 0.52
Gfra3O35118 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gfra3O35118 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gfra3O35118 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gfra3O35118 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gfra3O35118 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gfra3O35118 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gfra3O35118 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gfra3O35118 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.26■□□□□ 0.51
Gfra3O35118 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.26■□□□□ 0.51
Gfra3O35118 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gfra3O35118 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gfra3O35118 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gfra3O35118 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gfra3O35118 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.25■□□□□ 0.51
Gfra3O35118 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gfra3O35118 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gfra3O35118 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gfra3O35118 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.25■□□□□ 0.51
Gfra3O35118 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gfra3O35118 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gfra3O35118 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gfra3O35118 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gfra3O35118 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.24■□□□□ 0.51
Gfra3O35118 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gfra3O35118 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.24■□□□□ 0.51
Gfra3O35118 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gfra3O35118 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gfra3O35118 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gfra3O35118 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.23■□□□□ 0.51
Gfra3O35118 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gfra3O35118 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.23■□□□□ 0.51
Gfra3O35118 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gfra3O35118 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gfra3O35118 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gfra3O35118 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gfra3O35118 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gfra3O35118 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.22■□□□□ 0.51
Gfra3O35118 Gm7417-201ENSMUST00000192950 473 ntBASIC18.22■□□□□ 0.51
Gfra3O35118 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.22■□□□□ 0.51
Gfra3O35118 Gm40881-201ENSMUST00000223397 166 ntBASIC18.22■□□□□ 0.51
Gfra3O35118 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gfra3O35118 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gfra3O35118 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gfra3O35118 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gfra3O35118 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gfra3O35118 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gfra3O35118 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gfra3O35118 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Gfra3O35118 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gfra3O35118 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Gfra3O35118 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.21■□□□□ 0.51
Gfra3O35118 Gm10399-202ENSMUST00000202768 748 ntBASIC18.21■□□□□ 0.51
Gfra3O35118 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.21■□□□□ 0.51
Gfra3O35118 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.2■□□□□ 0.5
Gfra3O35118 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gfra3O35118 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gfra3O35118 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gfra3O35118 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.2■□□□□ 0.5
Gfra3O35118 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gfra3O35118 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gfra3O35118 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Gfra3O35118 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gfra3O35118 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gfra3O35118 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gfra3O35118 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gfra3O35118 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.19■□□□□ 0.5
Gfra3O35118 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gfra3O35118 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gfra3O35118 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gfra3O35118 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gfra3O35118 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gfra3O35118 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.18■□□□□ 0.5
Gfra3O35118 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gfra3O35118 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gfra3O35118 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gfra3O35118 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.17■□□□□ 0.5
Gfra3O35118 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.17■□□□□ 0.5
Gfra3O35118 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gfra3O35118 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.16■□□□□ 0.5
Gfra3O35118 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gfra3O35118 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms