Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf11bO08712 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf11bO08712 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf11bO08712 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Tnfrsf11bO08712 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf11bO08712 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf11bO08712 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf11bO08712 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf11bO08712 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf11bO08712 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf11bO08712 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf11bO08712 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Tnfrsf11bO08712 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Gm12366-201ENSMUST00000121722 873 ntBASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Gm5786-201ENSMUST00000085368 882 ntBASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf11bO08712 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.48■■□□□ 1.03
Tnfrsf11bO08712 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tnfrsf11bO08712 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Mir6538-201ENSMUST00000183713 110 ntBASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.46■■□□□ 1.03
Tnfrsf11bO08712 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf11bO08712 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf11bO08712 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Tnfrsf11bO08712 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf11bO08712 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Tnfrsf11bO08712 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf11bO08712 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf11bO08712 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf11bO08712 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf11bO08712 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf11bO08712 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf11bO08712 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf11bO08712 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Gm10420-201ENSMUST00000121713 882 ntBASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.41■■□□□ 1.02
Tnfrsf11bO08712 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Tnfrsf11bO08712 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tnfrsf11bO08712 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Tnfrsf11bO08712 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tnfrsf11bO08712 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.39■■□□□ 1.01
Tnfrsf11bO08712 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Tnfrsf11bO08712 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.39■■□□□ 1.01
Tnfrsf11bO08712 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11bO08712 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf11bO08712 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
Tnfrsf11bO08712 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms