Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.37■■□□□ 1.01
Smim22J3QP37 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smim22J3QP37 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smim22J3QP37 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim22J3QP37 Gm12251-201ENSMUST00000117893 792 ntBASIC21.36■■□□□ 1.01
Smim22J3QP37 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.36■■□□□ 1.01
Smim22J3QP37 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.36■■□□□ 1.01
Smim22J3QP37 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.36■■□□□ 1.01
Smim22J3QP37 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smim22J3QP37 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim22J3QP37 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smim22J3QP37 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.35■■□□□ 1.01
Smim22J3QP37 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Smim22J3QP37 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.35■■□□□ 1.01
Smim22J3QP37 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smim22J3QP37 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smim22J3QP37 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.34■■□□□ 1.01
Smim22J3QP37 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.34■■□□□ 1.01
Smim22J3QP37 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smim22J3QP37 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Smim22J3QP37 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smim22J3QP37 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smim22J3QP37 AV356131-201ENSMUST00000206201 750 ntBASIC21.33■■□□□ 1.01
Smim22J3QP37 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.33■■□□□ 1.01
Smim22J3QP37 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.33■■□□□ 1.01
Smim22J3QP37 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smim22J3QP37 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smim22J3QP37 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Smim22J3QP37 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smim22J3QP37 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smim22J3QP37 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.32■■□□□ 1
Smim22J3QP37 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smim22J3QP37 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Smim22J3QP37 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smim22J3QP37 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Smim22J3QP37 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.31■■□□□ 1
Smim22J3QP37 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.31■■□□□ 1
Smim22J3QP37 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.31■■□□□ 1
Smim22J3QP37 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim22J3QP37 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smim22J3QP37 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Smim22J3QP37 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.3■■□□□ 1
Smim22J3QP37 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.3■■□□□ 1
Smim22J3QP37 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Smim22J3QP37 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.29■■□□□ 1
Smim22J3QP37 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim22J3QP37 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim22J3QP37 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.29■■□□□ 1
Smim22J3QP37 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.29■■□□□ 1
Smim22J3QP37 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smim22J3QP37 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.29■■□□□ 1
Smim22J3QP37 Mir6982-201ENSMUST00000184354 68 ntBASIC21.29■■□□□ 1
Smim22J3QP37 Gm7143-201ENSMUST00000222811 859 ntBASIC21.29■■□□□ 1
Smim22J3QP37 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim22J3QP37 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smim22J3QP37 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.29■■□□□ 1
Smim22J3QP37 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Smim22J3QP37 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smim22J3QP37 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim22J3QP37 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smim22J3QP37 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim22J3QP37 Gm12441-201ENSMUST00000121806 588 ntBASIC21.28■■□□□ 1
Smim22J3QP37 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim22J3QP37 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Smim22J3QP37 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Smim22J3QP37 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smim22J3QP37 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smim22J3QP37 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.27■■□□□ 1
Smim22J3QP37 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.27■■□□□ 1
Smim22J3QP37 Gm43060-201ENSMUST00000200621 289 ntBASIC21.27■■□□□ 1
Smim22J3QP37 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smim22J3QP37 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.27■□□□□ 0.99
Smim22J3QP37 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smim22J3QP37 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Smim22J3QP37 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smim22J3QP37 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.26■□□□□ 0.99
Smim22J3QP37 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smim22J3QP37 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smim22J3QP37 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.26■□□□□ 0.99
Smim22J3QP37 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smim22J3QP37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Smim22J3QP37 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smim22J3QP37 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smim22J3QP37 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smim22J3QP37 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smim22J3QP37 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.25■□□□□ 0.99
Smim22J3QP37 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smim22J3QP37 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smim22J3QP37 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim22J3QP37 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smim22J3QP37 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim22J3QP37 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms