Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.05■□□□□ 0.96
Gm28043E0CXC2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm28043E0CXC2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28043E0CXC2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28043E0CXC2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm28043E0CXC2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28043E0CXC2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28043E0CXC2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28043E0CXC2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.03■□□□□ 0.96
Gm28043E0CXC2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28043E0CXC2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28043E0CXC2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm28043E0CXC2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Gm28043E0CXC2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm28043E0CXC2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm28043E0CXC2 Cap2-205ENSMUST00000225824 1634 ntBASIC21.02■□□□□ 0.96
Gm28043E0CXC2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm28043E0CXC2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gm28043E0CXC2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28043E0CXC2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28043E0CXC2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28043E0CXC2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28043E0CXC2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28043E0CXC2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Gm28043E0CXC2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28043E0CXC2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21■□□□□ 0.95
Gm28043E0CXC2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21■□□□□ 0.95
Gm28043E0CXC2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28043E0CXC2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28043E0CXC2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28043E0CXC2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm28043E0CXC2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28043E0CXC2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28043E0CXC2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28043E0CXC2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28043E0CXC2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28043E0CXC2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28043E0CXC2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28043E0CXC2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm28043E0CXC2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm28043E0CXC2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Gm28043E0CXC2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Gm22567-201ENSMUST00000175542 342 ntBASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.93■□□□□ 0.94
Gm28043E0CXC2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms