Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp27D3YV89 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp27D3YV89 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Mmp27D3YV89 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp27D3YV89 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp27D3YV89 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp27D3YV89 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Mmp27D3YV89 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp27D3YV89 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp27D3YV89 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp27D3YV89 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp27D3YV89 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Mmp27D3YV89 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp27D3YV89 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mmp27D3YV89 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp27D3YV89 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp27D3YV89 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp27D3YV89 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp27D3YV89 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mmp27D3YV89 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp27D3YV89 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp27D3YV89 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp27D3YV89 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp27D3YV89 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.69■□□□□ 0.42
Mmp27D3YV89 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp27D3YV89 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp27D3YV89 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp27D3YV89 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Mmp27D3YV89 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.68■□□□□ 0.42
Mmp27D3YV89 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Mmp27D3YV89 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp27D3YV89 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Mmp27D3YV89 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.67■□□□□ 0.42
Mmp27D3YV89 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.67■□□□□ 0.42
Mmp27D3YV89 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp27D3YV89 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.66■□□□□ 0.42
Mmp27D3YV89 Gm12366-201ENSMUST00000121722 873 ntBASIC17.66■□□□□ 0.42
Mmp27D3YV89 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp27D3YV89 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.66■□□□□ 0.42
Mmp27D3YV89 Gm5786-201ENSMUST00000085368 882 ntBASIC17.66■□□□□ 0.42
Mmp27D3YV89 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp27D3YV89 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp27D3YV89 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Mmp27D3YV89 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Gm27502-201ENSMUST00000183495 199 ntBASIC17.64■□□□□ 0.41
Mmp27D3YV89 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp27D3YV89 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp27D3YV89 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms