Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.51■□□□□ 0.23
Col6a5A6H584 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.51■□□□□ 0.23
Col6a5A6H584 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a5A6H584 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col6a5A6H584 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a5A6H584 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Col6a5A6H584 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a5A6H584 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a5A6H584 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a5A6H584 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a5A6H584 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a5A6H584 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a5A6H584 Gm12251-201ENSMUST00000117893 792 ntBASIC16.49■□□□□ 0.23
Col6a5A6H584 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a5A6H584 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a5A6H584 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col6a5A6H584 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.49■□□□□ 0.23
Col6a5A6H584 Gm10033-202ENSMUST00000211874 928 ntBASIC16.49■□□□□ 0.23
Col6a5A6H584 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col6a5A6H584 Zxda-201ENSMUST00000117281 2621 ntBASIC16.48■□□□□ 0.23
Col6a5A6H584 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a5A6H584 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a5A6H584 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.48■□□□□ 0.23
Col6a5A6H584 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a5A6H584 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Col6a5A6H584 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a5A6H584 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col6a5A6H584 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a5A6H584 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a5A6H584 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a5A6H584 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a5A6H584 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Col6a5A6H584 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a5A6H584 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a5A6H584 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a5A6H584 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a5A6H584 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a5A6H584 Gm12933-201ENSMUST00000120203 872 ntBASIC16.45■□□□□ 0.22
Col6a5A6H584 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a5A6H584 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Col6a5A6H584 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a5A6H584 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a5A6H584 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.44■□□□□ 0.22
Col6a5A6H584 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a5A6H584 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col6a5A6H584 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a5A6H584 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a5A6H584 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.44■□□□□ 0.22
Col6a5A6H584 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.43■□□□□ 0.22
Col6a5A6H584 Nespas-201ENSMUST00000143738 1083 ntBASIC16.43■□□□□ 0.22
Col6a5A6H584 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.43■□□□□ 0.22
Col6a5A6H584 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.43■□□□□ 0.22
Col6a5A6H584 AV356131-201ENSMUST00000206201 750 ntBASIC16.43■□□□□ 0.22
Col6a5A6H584 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a5A6H584 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a5A6H584 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.43■□□□□ 0.22
Col6a5A6H584 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a5A6H584 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a5A6H584 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a5A6H584 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.42■□□□□ 0.22
Col6a5A6H584 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a5A6H584 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Col6a5A6H584 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.42■□□□□ 0.22
Col6a5A6H584 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a5A6H584 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a5A6H584 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a5A6H584 Mir7071-201ENSMUST00000184847 69 ntBASIC16.41■□□□□ 0.22
Col6a5A6H584 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.41■□□□□ 0.22
Col6a5A6H584 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.41■□□□□ 0.22
Col6a5A6H584 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a5A6H584 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col6a5A6H584 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.41■□□□□ 0.22
Col6a5A6H584 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.41■□□□□ 0.22
Col6a5A6H584 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.41■□□□□ 0.22
Col6a5A6H584 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a5A6H584 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a5A6H584 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.4■□□□□ 0.22
Col6a5A6H584 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a5A6H584 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.4■□□□□ 0.22
Col6a5A6H584 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.4■□□□□ 0.22
Col6a5A6H584 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a5A6H584 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col6a5A6H584 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a5A6H584 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a5A6H584 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a5A6H584 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a5A6H584 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a5A6H584 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Col6a5A6H584 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.39■□□□□ 0.21
Col6a5A6H584 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col6a5A6H584 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a5A6H584 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col6a5A6H584 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a5A6H584 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a5A6H584 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a5A6H584 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a5A6H584 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a5A6H584 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a5A6H584 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a5A6H584 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms