Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.15
Shroom2A2ALU4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Shroom2A2ALU4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Shroom2A2ALU4 Gm12251-201ENSMUST00000117893 792 ntBASIC34.75■■■■□ 3.15
Shroom2A2ALU4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Shroom2A2ALU4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Shroom2A2ALU4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Shroom2A2ALU4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Shroom2A2ALU4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Shroom2A2ALU4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Shroom2A2ALU4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Shroom2A2ALU4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Shroom2A2ALU4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
Shroom2A2ALU4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Shroom2A2ALU4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Shroom2A2ALU4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Fezf2-202ENSMUST00000224023 1917 ntBASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Shroom2A2ALU4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC34.7■■■■□ 3.15
Shroom2A2ALU4 Gm10620-201ENSMUST00000098379 1332 ntBASIC34.69■■■■□ 3.14
Shroom2A2ALU4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shroom2A2ALU4 Gm26833-201ENSMUST00000180899 440 ntBASIC34.69■■■■□ 3.14
Shroom2A2ALU4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC34.69■■■■□ 3.14
Shroom2A2ALU4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shroom2A2ALU4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shroom2A2ALU4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Shroom2A2ALU4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC34.68■■■■□ 3.14
Shroom2A2ALU4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Shroom2A2ALU4 Gm10129-202ENSMUST00000193100 1316 ntBASIC34.68■■■■□ 3.14
Shroom2A2ALU4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Shroom2A2ALU4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Shroom2A2ALU4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Shroom2A2ALU4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Shroom2A2ALU4 Nespas-201ENSMUST00000143738 1083 ntBASIC34.66■■■■□ 3.14
Shroom2A2ALU4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
Shroom2A2ALU4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Shroom2A2ALU4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Shroom2A2ALU4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom2A2ALU4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom2A2ALU4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom2A2ALU4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
Shroom2A2ALU4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC34.64■■■■□ 3.14
Shroom2A2ALU4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
Shroom2A2ALU4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC34.62■■■■□ 3.13
Shroom2A2ALU4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Shroom2A2ALU4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Shroom2A2ALU4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC34.61■■■■□ 3.13
Shroom2A2ALU4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
Shroom2A2ALU4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom2A2ALU4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom2A2ALU4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Shroom2A2ALU4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC34.6■■■■□ 3.13
Shroom2A2ALU4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Shroom2A2ALU4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Shroom2A2ALU4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC34.59■■■■□ 3.13
Shroom2A2ALU4 Gm10033-202ENSMUST00000211874 928 ntBASIC34.58■■■■□ 3.13
Shroom2A2ALU4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Shroom2A2ALU4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC34.57■■■■□ 3.12
Shroom2A2ALU4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom2A2ALU4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom2A2ALU4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Shroom2A2ALU4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC34.54■■■■□ 3.12
Shroom2A2ALU4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC34.53■■■■□ 3.12
Shroom2A2ALU4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Shroom2A2ALU4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC34.53■■■■□ 3.12
Shroom2A2ALU4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Gm5576-201ENSMUST00000075809 1236 ntBASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Gm43060-201ENSMUST00000200621 289 ntBASIC34.52■■■■□ 3.12
Shroom2A2ALU4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC34.51■■■■□ 3.11
Shroom2A2ALU4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC34.5■■■■□ 3.11
Shroom2A2ALU4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Shroom2A2ALU4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms