Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.33■□□□□ 0.04
Trbv16A0A0B4J1H3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.33■□□□□ 0.04
Trbv16A0A0B4J1H3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv16A0A0B4J1H3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv16A0A0B4J1H3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv16A0A0B4J1H3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv16A0A0B4J1H3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv16A0A0B4J1H3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv16A0A0B4J1H3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv16A0A0B4J1H3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv16A0A0B4J1H3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv16A0A0B4J1H3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Trbv16A0A0B4J1H3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv16A0A0B4J1H3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Scarna2-201ENSMUST00000157560 414 ntBASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv16A0A0B4J1H3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv16A0A0B4J1H3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv16A0A0B4J1H3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Gm16437-201ENSMUST00000025669 507 ntBASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.27■□□□□ 0.04
Trbv16A0A0B4J1H3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv16A0A0B4J1H3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv16A0A0B4J1H3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv16A0A0B4J1H3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Trbv16A0A0B4J1H3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv16A0A0B4J1H3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv16A0A0B4J1H3 Gm11687-201ENSMUST00000118911 886 ntBASIC15.26■□□□□ 0.03
Trbv16A0A0B4J1H3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv16A0A0B4J1H3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv16A0A0B4J1H3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv16A0A0B4J1H3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms