Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv3-4A0A0A6YXF1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.64■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ighv3-4A0A0A6YXF1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.61■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.59■□□□□ 0.41
Ighv3-4A0A0A6YXF1 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.59■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-4A0A0A6YXF1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.58■□□□□ 0.4
Ighv3-4A0A0A6YXF1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.58■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.58■□□□□ 0.4
Ighv3-4A0A0A6YXF1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Gm9870-201ENSMUST00000063874 645 ntBASIC17.57■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-4A0A0A6YXF1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.56■□□□□ 0.4
Ighv3-4A0A0A6YXF1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms